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Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea

For a long time, various epidemics, such as lower respiratory infections and diarrheal diseases, have caused serious social losses and costs. Various methods for analyzing infectious disease occurrences have been proposed for effective prevention and proactive response to reduce such losses and cost...

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Detalles Bibliográficos
Autores principales: Jung, Seungwon, Moon, Jaeuk, Hwang, Eenjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7370004/
https://www.ncbi.nlm.nih.gov/pubmed/32640742
http://dx.doi.org/10.3390/ijerph17134872
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author Jung, Seungwon
Moon, Jaeuk
Hwang, Eenjun
author_facet Jung, Seungwon
Moon, Jaeuk
Hwang, Eenjun
author_sort Jung, Seungwon
collection PubMed
description For a long time, various epidemics, such as lower respiratory infections and diarrheal diseases, have caused serious social losses and costs. Various methods for analyzing infectious disease occurrences have been proposed for effective prevention and proactive response to reduce such losses and costs. However, the results of the occurrence analyses were limited because numerous factors affect the outbreak of infectious diseases and there are complex interactions between these factors. To alleviate this limitation, we propose a cluster-based analysis scheme of infectious disease occurrences that can discover commonalities or differences between clusters by grouping elements with similar occurrence patterns. To do this, we collect and preprocess infectious disease occurrence data according to time, region, and disease. Then, we construct a tensor for the data and apply Tucker decomposition to extract latent features in the dimensions of time, region, and disease. Based on these latent features, we conduct k-means clustering and analyze the results for each dimension. To demonstrate the effectiveness of this scheme, we conduct a case study on data from South Korea and report some of the results.
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spelling pubmed-73700042020-07-21 Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea Jung, Seungwon Moon, Jaeuk Hwang, Eenjun Int J Environ Res Public Health Article For a long time, various epidemics, such as lower respiratory infections and diarrheal diseases, have caused serious social losses and costs. Various methods for analyzing infectious disease occurrences have been proposed for effective prevention and proactive response to reduce such losses and costs. However, the results of the occurrence analyses were limited because numerous factors affect the outbreak of infectious diseases and there are complex interactions between these factors. To alleviate this limitation, we propose a cluster-based analysis scheme of infectious disease occurrences that can discover commonalities or differences between clusters by grouping elements with similar occurrence patterns. To do this, we collect and preprocess infectious disease occurrence data according to time, region, and disease. Then, we construct a tensor for the data and apply Tucker decomposition to extract latent features in the dimensions of time, region, and disease. Based on these latent features, we conduct k-means clustering and analyze the results for each dimension. To demonstrate the effectiveness of this scheme, we conduct a case study on data from South Korea and report some of the results. MDPI 2020-07-06 2020-07 /pmc/articles/PMC7370004/ /pubmed/32640742 http://dx.doi.org/10.3390/ijerph17134872 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Jung, Seungwon
Moon, Jaeuk
Hwang, Eenjun
Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title_full Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title_fullStr Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title_full_unstemmed Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title_short Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea
title_sort cluster-based analysis of infectious disease occurrences using tensor decomposition: a case study of south korea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7370004/
https://www.ncbi.nlm.nih.gov/pubmed/32640742
http://dx.doi.org/10.3390/ijerph17134872
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