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Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images

BACKGROUND: Impaired function of masticatory muscles will lead to trismus. Routine delineation of these muscles during planning may improve dose tracking and facilitate dose reduction resulting in decreased radiation-related trismus. This study aimed to compare a deep learning model with a commercia...

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Autores principales: Chen, Wen, Li, Yimin, Dyer, Brandon A., Feng, Xue, Rao, Shyam, Benedict, Stanley H., Chen, Quan, Rong, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7372849/
https://www.ncbi.nlm.nih.gov/pubmed/32690103
http://dx.doi.org/10.1186/s13014-020-01617-0
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author Chen, Wen
Li, Yimin
Dyer, Brandon A.
Feng, Xue
Rao, Shyam
Benedict, Stanley H.
Chen, Quan
Rong, Yi
author_facet Chen, Wen
Li, Yimin
Dyer, Brandon A.
Feng, Xue
Rao, Shyam
Benedict, Stanley H.
Chen, Quan
Rong, Yi
author_sort Chen, Wen
collection PubMed
description BACKGROUND: Impaired function of masticatory muscles will lead to trismus. Routine delineation of these muscles during planning may improve dose tracking and facilitate dose reduction resulting in decreased radiation-related trismus. This study aimed to compare a deep learning model with a commercial atlas-based model for fast auto-segmentation of the masticatory muscles on head and neck computed tomography (CT) images. MATERIAL AND METHODS: Paired masseter (M), temporalis (T), medial and lateral pterygoid (MP, LP) muscles were manually segmented on 56 CT images. CT images were randomly divided into training (n = 27) and validation (n = 29) cohorts. Two methods were used for automatic delineation of masticatory muscles (MMs): Deep learning auto-segmentation (DLAS) and atlas-based auto-segmentation (ABAS). The automatic algorithms were evaluated using Dice similarity coefficient (DSC), recall, precision, Hausdorff distance (HD), HD95, and mean surface distance (MSD). A consolidated score was calculated by normalizing the metrics against interobserver variability and averaging over all patients. Differences in dose (∆Dose) to MMs for DLAS and ABAS segmentations were assessed. A paired t-test was used to compare the geometric and dosimetric difference between DLAS and ABAS methods. RESULTS: DLAS outperformed ABAS in delineating all MMs (p < 0.05). The DLAS mean DSC for M, T, MP, and LP ranged from 0.83 ± 0.03 to 0.89 ± 0.02, the ABAS mean DSC ranged from 0.79 ± 0.05 to 0.85 ± 0.04. The mean value for recall, HD, HD95, MSD also improved with DLAS for auto-segmentation. Interobserver variation revealed the highest variability in DSC and MSD for both T and MP, and the highest scores were achieved for T by both automatic algorithms. With few exceptions, the mean ∆D98%, ∆D95%, ∆D50%, and ∆D2% for all structures were below 10% for DLAS and ABAS and had no detectable statistical difference (P > 0.05). DLAS based contours had dose endpoints more closely matched with that of the manually segmented when compared with ABAS. CONCLUSIONS: DLAS auto-segmentation of masticatory muscles for the head and neck radiotherapy had improved segmentation accuracy compared with ABAS with no qualitative difference in dosimetric endpoints compared to manually segmented contours.
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spelling pubmed-73728492020-07-21 Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images Chen, Wen Li, Yimin Dyer, Brandon A. Feng, Xue Rao, Shyam Benedict, Stanley H. Chen, Quan Rong, Yi Radiat Oncol Research BACKGROUND: Impaired function of masticatory muscles will lead to trismus. Routine delineation of these muscles during planning may improve dose tracking and facilitate dose reduction resulting in decreased radiation-related trismus. This study aimed to compare a deep learning model with a commercial atlas-based model for fast auto-segmentation of the masticatory muscles on head and neck computed tomography (CT) images. MATERIAL AND METHODS: Paired masseter (M), temporalis (T), medial and lateral pterygoid (MP, LP) muscles were manually segmented on 56 CT images. CT images were randomly divided into training (n = 27) and validation (n = 29) cohorts. Two methods were used for automatic delineation of masticatory muscles (MMs): Deep learning auto-segmentation (DLAS) and atlas-based auto-segmentation (ABAS). The automatic algorithms were evaluated using Dice similarity coefficient (DSC), recall, precision, Hausdorff distance (HD), HD95, and mean surface distance (MSD). A consolidated score was calculated by normalizing the metrics against interobserver variability and averaging over all patients. Differences in dose (∆Dose) to MMs for DLAS and ABAS segmentations were assessed. A paired t-test was used to compare the geometric and dosimetric difference between DLAS and ABAS methods. RESULTS: DLAS outperformed ABAS in delineating all MMs (p < 0.05). The DLAS mean DSC for M, T, MP, and LP ranged from 0.83 ± 0.03 to 0.89 ± 0.02, the ABAS mean DSC ranged from 0.79 ± 0.05 to 0.85 ± 0.04. The mean value for recall, HD, HD95, MSD also improved with DLAS for auto-segmentation. Interobserver variation revealed the highest variability in DSC and MSD for both T and MP, and the highest scores were achieved for T by both automatic algorithms. With few exceptions, the mean ∆D98%, ∆D95%, ∆D50%, and ∆D2% for all structures were below 10% for DLAS and ABAS and had no detectable statistical difference (P > 0.05). DLAS based contours had dose endpoints more closely matched with that of the manually segmented when compared with ABAS. CONCLUSIONS: DLAS auto-segmentation of masticatory muscles for the head and neck radiotherapy had improved segmentation accuracy compared with ABAS with no qualitative difference in dosimetric endpoints compared to manually segmented contours. BioMed Central 2020-07-20 /pmc/articles/PMC7372849/ /pubmed/32690103 http://dx.doi.org/10.1186/s13014-020-01617-0 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Chen, Wen
Li, Yimin
Dyer, Brandon A.
Feng, Xue
Rao, Shyam
Benedict, Stanley H.
Chen, Quan
Rong, Yi
Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title_full Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title_fullStr Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title_full_unstemmed Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title_short Deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck CT images
title_sort deep learning vs. atlas-based models for fast auto-segmentation of the masticatory muscles on head and neck ct images
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7372849/
https://www.ncbi.nlm.nih.gov/pubmed/32690103
http://dx.doi.org/10.1186/s13014-020-01617-0
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