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Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373283/ https://www.ncbi.nlm.nih.gov/pubmed/32692763 http://dx.doi.org/10.1371/journal.pone.0236069 |
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author | Wang, Laidi Liang, Wenshuang Wang, Shasha Wang, Zhixiu Bai, Hao Jiang, Yong Bi, Yulin Chen, Guohong Chang, Guobin |
author_facet | Wang, Laidi Liang, Wenshuang Wang, Shasha Wang, Zhixiu Bai, Hao Jiang, Yong Bi, Yulin Chen, Guohong Chang, Guobin |
author_sort | Wang, Laidi |
collection | PubMed |
description | Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput transcriptome sequencing was used to detect circRNAs present in cherry valley duck pre-adipocyte and adipocyte differentiation over 3 days. We identified 9,311 circRNAs and 141 differentially expressed circRNAs. Sequencing results were verified through qRT-PCR using seven randomly selected circRNAs, and competing endogenous RNA (ceRNA) networks were exhibited by ten important circRNAs in duck adipocyte differentiation. circRNA plexin A1 (circ-PLXNA1) was detected in duck adipocytes and mainly expressed in adipose, leg muscle and liver. Inhibition of circ-PLXNA1 limited the differentiation of duck adipocyte. There were four corresponding miRNAs for circ-PLXNA1 and 313 target genes for those miRNAs. CeRNA“circ-PLXNA1/miR-214/CTNNB1 axis” was focused and verified by a dual-luciferase reporter experiment. After co-transfection of cells with si-circ-PLXNA1 and miR-214 mimics, the expression level of CTNNB1 was down-regulated, triglyceride content and the adipogenic capacity of preadipocytes decreased. While there were no significant change after si-CTNNB1 transfection. All these results provide further insight into the circRNAs, especially for circ-PLXNA1 in duck adipocyte differentiation. |
format | Online Article Text |
id | pubmed-7373283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-73732832020-08-13 Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation Wang, Laidi Liang, Wenshuang Wang, Shasha Wang, Zhixiu Bai, Hao Jiang, Yong Bi, Yulin Chen, Guohong Chang, Guobin PLoS One Research Article Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput transcriptome sequencing was used to detect circRNAs present in cherry valley duck pre-adipocyte and adipocyte differentiation over 3 days. We identified 9,311 circRNAs and 141 differentially expressed circRNAs. Sequencing results were verified through qRT-PCR using seven randomly selected circRNAs, and competing endogenous RNA (ceRNA) networks were exhibited by ten important circRNAs in duck adipocyte differentiation. circRNA plexin A1 (circ-PLXNA1) was detected in duck adipocytes and mainly expressed in adipose, leg muscle and liver. Inhibition of circ-PLXNA1 limited the differentiation of duck adipocyte. There were four corresponding miRNAs for circ-PLXNA1 and 313 target genes for those miRNAs. CeRNA“circ-PLXNA1/miR-214/CTNNB1 axis” was focused and verified by a dual-luciferase reporter experiment. After co-transfection of cells with si-circ-PLXNA1 and miR-214 mimics, the expression level of CTNNB1 was down-regulated, triglyceride content and the adipogenic capacity of preadipocytes decreased. While there were no significant change after si-CTNNB1 transfection. All these results provide further insight into the circRNAs, especially for circ-PLXNA1 in duck adipocyte differentiation. Public Library of Science 2020-07-21 /pmc/articles/PMC7373283/ /pubmed/32692763 http://dx.doi.org/10.1371/journal.pone.0236069 Text en © 2020 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wang, Laidi Liang, Wenshuang Wang, Shasha Wang, Zhixiu Bai, Hao Jiang, Yong Bi, Yulin Chen, Guohong Chang, Guobin Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title | Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title_full | Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title_fullStr | Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title_full_unstemmed | Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title_short | Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation |
title_sort | circular rna expression profiling reveals that circ-plxna1 functions in duck adipocyte differentiation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373283/ https://www.ncbi.nlm.nih.gov/pubmed/32692763 http://dx.doi.org/10.1371/journal.pone.0236069 |
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