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Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation

Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput...

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Autores principales: Wang, Laidi, Liang, Wenshuang, Wang, Shasha, Wang, Zhixiu, Bai, Hao, Jiang, Yong, Bi, Yulin, Chen, Guohong, Chang, Guobin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373283/
https://www.ncbi.nlm.nih.gov/pubmed/32692763
http://dx.doi.org/10.1371/journal.pone.0236069
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author Wang, Laidi
Liang, Wenshuang
Wang, Shasha
Wang, Zhixiu
Bai, Hao
Jiang, Yong
Bi, Yulin
Chen, Guohong
Chang, Guobin
author_facet Wang, Laidi
Liang, Wenshuang
Wang, Shasha
Wang, Zhixiu
Bai, Hao
Jiang, Yong
Bi, Yulin
Chen, Guohong
Chang, Guobin
author_sort Wang, Laidi
collection PubMed
description Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput transcriptome sequencing was used to detect circRNAs present in cherry valley duck pre-adipocyte and adipocyte differentiation over 3 days. We identified 9,311 circRNAs and 141 differentially expressed circRNAs. Sequencing results were verified through qRT-PCR using seven randomly selected circRNAs, and competing endogenous RNA (ceRNA) networks were exhibited by ten important circRNAs in duck adipocyte differentiation. circRNA plexin A1 (circ-PLXNA1) was detected in duck adipocytes and mainly expressed in adipose, leg muscle and liver. Inhibition of circ-PLXNA1 limited the differentiation of duck adipocyte. There were four corresponding miRNAs for circ-PLXNA1 and 313 target genes for those miRNAs. CeRNA“circ-PLXNA1/miR-214/CTNNB1 axis” was focused and verified by a dual-luciferase reporter experiment. After co-transfection of cells with si-circ-PLXNA1 and miR-214 mimics, the expression level of CTNNB1 was down-regulated, triglyceride content and the adipogenic capacity of preadipocytes decreased. While there were no significant change after si-CTNNB1 transfection. All these results provide further insight into the circRNAs, especially for circ-PLXNA1 in duck adipocyte differentiation.
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spelling pubmed-73732832020-08-13 Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation Wang, Laidi Liang, Wenshuang Wang, Shasha Wang, Zhixiu Bai, Hao Jiang, Yong Bi, Yulin Chen, Guohong Chang, Guobin PLoS One Research Article Adipocytes are derived from pluripotent mesenchymal stem cells through adipogenesis. Pre-adipocyte differentiation in poultry greatly influences fat deposition and meat quality. Circular RNAs (circRNAs) have an important function in cancer and some differentiation processes. Herein, high-throughput transcriptome sequencing was used to detect circRNAs present in cherry valley duck pre-adipocyte and adipocyte differentiation over 3 days. We identified 9,311 circRNAs and 141 differentially expressed circRNAs. Sequencing results were verified through qRT-PCR using seven randomly selected circRNAs, and competing endogenous RNA (ceRNA) networks were exhibited by ten important circRNAs in duck adipocyte differentiation. circRNA plexin A1 (circ-PLXNA1) was detected in duck adipocytes and mainly expressed in adipose, leg muscle and liver. Inhibition of circ-PLXNA1 limited the differentiation of duck adipocyte. There were four corresponding miRNAs for circ-PLXNA1 and 313 target genes for those miRNAs. CeRNA“circ-PLXNA1/miR-214/CTNNB1 axis” was focused and verified by a dual-luciferase reporter experiment. After co-transfection of cells with si-circ-PLXNA1 and miR-214 mimics, the expression level of CTNNB1 was down-regulated, triglyceride content and the adipogenic capacity of preadipocytes decreased. While there were no significant change after si-CTNNB1 transfection. All these results provide further insight into the circRNAs, especially for circ-PLXNA1 in duck adipocyte differentiation. Public Library of Science 2020-07-21 /pmc/articles/PMC7373283/ /pubmed/32692763 http://dx.doi.org/10.1371/journal.pone.0236069 Text en © 2020 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wang, Laidi
Liang, Wenshuang
Wang, Shasha
Wang, Zhixiu
Bai, Hao
Jiang, Yong
Bi, Yulin
Chen, Guohong
Chang, Guobin
Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title_full Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title_fullStr Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title_full_unstemmed Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title_short Circular RNA expression profiling reveals that circ-PLXNA1 functions in duck adipocyte differentiation
title_sort circular rna expression profiling reveals that circ-plxna1 functions in duck adipocyte differentiation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373283/
https://www.ncbi.nlm.nih.gov/pubmed/32692763
http://dx.doi.org/10.1371/journal.pone.0236069
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