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A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373430/ https://www.ncbi.nlm.nih.gov/pubmed/32553117 http://dx.doi.org/10.7554/eLife.56525 |
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author | Xing, Wenmin Muhlrad, Denise Parker, Roy Rosen, Michael K |
author_facet | Xing, Wenmin Muhlrad, Denise Parker, Roy Rosen, Michael K |
author_sort | Xing, Wenmin |
collection | PubMed |
description | P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of the major proteins in yeast P bodies. Only seven proteins are highly concentrated in P bodies (5.1–15µM); the 24 others examined are appreciably lower (most ≤ 2.6µM). P body concentration correlates inversely with cytoplasmic exchange rate. Sequence elements driving Dcp2 concentration into P bodies are distributed across the protein and act synergistically. Our data indicate that P bodies, and probably other condensates, are compositionally simpler than suggested by proteomic analyses, with implications for specificity, reconstitution and evolution. |
format | Online Article Text |
id | pubmed-7373430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-73734302020-07-22 A quantitative inventory of yeast P body proteins reveals principles of composition and specificity Xing, Wenmin Muhlrad, Denise Parker, Roy Rosen, Michael K eLife Cell Biology P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of the major proteins in yeast P bodies. Only seven proteins are highly concentrated in P bodies (5.1–15µM); the 24 others examined are appreciably lower (most ≤ 2.6µM). P body concentration correlates inversely with cytoplasmic exchange rate. Sequence elements driving Dcp2 concentration into P bodies are distributed across the protein and act synergistically. Our data indicate that P bodies, and probably other condensates, are compositionally simpler than suggested by proteomic analyses, with implications for specificity, reconstitution and evolution. eLife Sciences Publications, Ltd 2020-06-19 /pmc/articles/PMC7373430/ /pubmed/32553117 http://dx.doi.org/10.7554/eLife.56525 Text en © 2020, Xing et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Cell Biology Xing, Wenmin Muhlrad, Denise Parker, Roy Rosen, Michael K A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title | A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title_full | A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title_fullStr | A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title_full_unstemmed | A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title_short | A quantitative inventory of yeast P body proteins reveals principles of composition and specificity |
title_sort | quantitative inventory of yeast p body proteins reveals principles of composition and specificity |
topic | Cell Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373430/ https://www.ncbi.nlm.nih.gov/pubmed/32553117 http://dx.doi.org/10.7554/eLife.56525 |
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