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A quantitative inventory of yeast P body proteins reveals principles of composition and specificity

P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of...

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Detalles Bibliográficos
Autores principales: Xing, Wenmin, Muhlrad, Denise, Parker, Roy, Rosen, Michael K
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373430/
https://www.ncbi.nlm.nih.gov/pubmed/32553117
http://dx.doi.org/10.7554/eLife.56525
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author Xing, Wenmin
Muhlrad, Denise
Parker, Roy
Rosen, Michael K
author_facet Xing, Wenmin
Muhlrad, Denise
Parker, Roy
Rosen, Michael K
author_sort Xing, Wenmin
collection PubMed
description P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of the major proteins in yeast P bodies. Only seven proteins are highly concentrated in P bodies (5.1–15µM); the 24 others examined are appreciably lower (most ≤ 2.6µM). P body concentration correlates inversely with cytoplasmic exchange rate. Sequence elements driving Dcp2 concentration into P bodies are distributed across the protein and act synergistically. Our data indicate that P bodies, and probably other condensates, are compositionally simpler than suggested by proteomic analyses, with implications for specificity, reconstitution and evolution.
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spelling pubmed-73734302020-07-22 A quantitative inventory of yeast P body proteins reveals principles of composition and specificity Xing, Wenmin Muhlrad, Denise Parker, Roy Rosen, Michael K eLife Cell Biology P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of the major proteins in yeast P bodies. Only seven proteins are highly concentrated in P bodies (5.1–15µM); the 24 others examined are appreciably lower (most ≤ 2.6µM). P body concentration correlates inversely with cytoplasmic exchange rate. Sequence elements driving Dcp2 concentration into P bodies are distributed across the protein and act synergistically. Our data indicate that P bodies, and probably other condensates, are compositionally simpler than suggested by proteomic analyses, with implications for specificity, reconstitution and evolution. eLife Sciences Publications, Ltd 2020-06-19 /pmc/articles/PMC7373430/ /pubmed/32553117 http://dx.doi.org/10.7554/eLife.56525 Text en © 2020, Xing et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Cell Biology
Xing, Wenmin
Muhlrad, Denise
Parker, Roy
Rosen, Michael K
A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title_full A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title_fullStr A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title_full_unstemmed A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title_short A quantitative inventory of yeast P body proteins reveals principles of composition and specificity
title_sort quantitative inventory of yeast p body proteins reveals principles of composition and specificity
topic Cell Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373430/
https://www.ncbi.nlm.nih.gov/pubmed/32553117
http://dx.doi.org/10.7554/eLife.56525
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