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Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach

Marked enhancement of the fibroglandular tissue on contrast-enhanced breast magnetic resonance imaging (MRI) may affect lesion detection and classification and is suggested to be associated with higher risk of developing breast cancer. The background parenchymal enhancement (BPE) is qualitatively cl...

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Autores principales: Borkowski, Karol, Rossi, Cristina, Ciritsis, Alexander, Marcon, Magda, Hejduk, Patryk, Stieb, Sonja, Boss, Andreas, Berger, Nicole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373599/
https://www.ncbi.nlm.nih.gov/pubmed/32702902
http://dx.doi.org/10.1097/MD.0000000000021243
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author Borkowski, Karol
Rossi, Cristina
Ciritsis, Alexander
Marcon, Magda
Hejduk, Patryk
Stieb, Sonja
Boss, Andreas
Berger, Nicole
author_facet Borkowski, Karol
Rossi, Cristina
Ciritsis, Alexander
Marcon, Magda
Hejduk, Patryk
Stieb, Sonja
Boss, Andreas
Berger, Nicole
author_sort Borkowski, Karol
collection PubMed
description Marked enhancement of the fibroglandular tissue on contrast-enhanced breast magnetic resonance imaging (MRI) may affect lesion detection and classification and is suggested to be associated with higher risk of developing breast cancer. The background parenchymal enhancement (BPE) is qualitatively classified according to the BI-RADS atlas into the categories “minimal,” “mild,” “moderate,” and “marked.” The purpose of this study was to train a deep convolutional neural network (dCNN) for standardized and automatic classification of BPE categories. This IRB-approved retrospective study included 11,769 single MR images from 149 patients. The MR images were derived from the subtraction between the first post-contrast volume and the native T1-weighted images. A hierarchic approach was implemented relying on 2 dCNN models for detection of MR-slices imaging breast tissue and for BPE classification, respectively. Data annotation was performed by 2 board-certified radiologists. The consensus of the 2 radiologists was chosen as reference for BPE classification. The clinical performances of the single readers and of the dCNN were statistically compared using the quadratic Cohen's kappa. Slices depicting the breast were classified with training, validation, and real-world (test) accuracies of 98%, 96%, and 97%, respectively. Over the 4 classes, the BPE classification was reached with mean accuracies of 74% for training, 75% for the validation, and 75% for the real word dataset. As compared to the reference, the inter-reader reliabilities for the radiologists were 0.780 (reader 1) and 0.679 (reader 2). On the other hand, the reliability for the dCNN model was 0.815. Automatic classification of BPE can be performed with high accuracy and support the standardization of tissue classification in MRI.
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spelling pubmed-73735992020-08-05 Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach Borkowski, Karol Rossi, Cristina Ciritsis, Alexander Marcon, Magda Hejduk, Patryk Stieb, Sonja Boss, Andreas Berger, Nicole Medicine (Baltimore) 6800 Marked enhancement of the fibroglandular tissue on contrast-enhanced breast magnetic resonance imaging (MRI) may affect lesion detection and classification and is suggested to be associated with higher risk of developing breast cancer. The background parenchymal enhancement (BPE) is qualitatively classified according to the BI-RADS atlas into the categories “minimal,” “mild,” “moderate,” and “marked.” The purpose of this study was to train a deep convolutional neural network (dCNN) for standardized and automatic classification of BPE categories. This IRB-approved retrospective study included 11,769 single MR images from 149 patients. The MR images were derived from the subtraction between the first post-contrast volume and the native T1-weighted images. A hierarchic approach was implemented relying on 2 dCNN models for detection of MR-slices imaging breast tissue and for BPE classification, respectively. Data annotation was performed by 2 board-certified radiologists. The consensus of the 2 radiologists was chosen as reference for BPE classification. The clinical performances of the single readers and of the dCNN were statistically compared using the quadratic Cohen's kappa. Slices depicting the breast were classified with training, validation, and real-world (test) accuracies of 98%, 96%, and 97%, respectively. Over the 4 classes, the BPE classification was reached with mean accuracies of 74% for training, 75% for the validation, and 75% for the real word dataset. As compared to the reference, the inter-reader reliabilities for the radiologists were 0.780 (reader 1) and 0.679 (reader 2). On the other hand, the reliability for the dCNN model was 0.815. Automatic classification of BPE can be performed with high accuracy and support the standardization of tissue classification in MRI. Wolters Kluwer Health 2020-07-17 /pmc/articles/PMC7373599/ /pubmed/32702902 http://dx.doi.org/10.1097/MD.0000000000021243 Text en Copyright © 2020 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 6800
Borkowski, Karol
Rossi, Cristina
Ciritsis, Alexander
Marcon, Magda
Hejduk, Patryk
Stieb, Sonja
Boss, Andreas
Berger, Nicole
Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title_full Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title_fullStr Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title_full_unstemmed Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title_short Fully automatic classification of breast MRI background parenchymal enhancement using a transfer learning approach
title_sort fully automatic classification of breast mri background parenchymal enhancement using a transfer learning approach
topic 6800
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7373599/
https://www.ncbi.nlm.nih.gov/pubmed/32702902
http://dx.doi.org/10.1097/MD.0000000000021243
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