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A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments

Dark carbon fixation (DCF) by chemoautotrophic microorganisms can sustain food webs in the seafloor by local production of organic matter independent of photosynthesis. The process has received considerable attention in deep sea systems, such as hydrothermal vents, but the regulation, depth distribu...

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Autores principales: Vasquez‐Cardenas, Diana, Meysman, Filip J. R., Boschker, Henricus T. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7375125/
https://www.ncbi.nlm.nih.gov/pubmed/32713991
http://dx.doi.org/10.1029/2019GB006298
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author Vasquez‐Cardenas, Diana
Meysman, Filip J. R.
Boschker, Henricus T. S.
author_facet Vasquez‐Cardenas, Diana
Meysman, Filip J. R.
Boschker, Henricus T. S.
author_sort Vasquez‐Cardenas, Diana
collection PubMed
description Dark carbon fixation (DCF) by chemoautotrophic microorganisms can sustain food webs in the seafloor by local production of organic matter independent of photosynthesis. The process has received considerable attention in deep sea systems, such as hydrothermal vents, but the regulation, depth distribution, and global importance of coastal sedimentary DCF have not been systematically investigated. Here we surveyed eight coastal sediments by means of stable isotope probing ((13)C‐DIC) combined with bacterial biomarkers (phospholipid‐derived fatty acids) and compiled additional rates from literature into a global database. DCF rates in coastal sediments range from 0.07 to 36.30 mmol C m(−2) day(−1), and there is a linear relation between DCF and water depth. The CO(2) fixation ratio (DCF/CO(2) respired) also shows a trend with water depth, decreasing from 0.09 in nearshore environments to 0.04 in continental shelf sediments. Five types of depth distributions of chemoautotrophic activity are identified based on the mode of pore water transport (advective, bioturbated, and diffusive) and the dominant pathway of microbial sulfur oxidation. Extrapolated to the global coastal ocean, we estimate a DCF rate of 0.04 to 0.06 Pg C year(−1), which is less than previous estimates based on indirect measurements (0.15 Pg C year(−1)), but remains substantially higher than the global DCF rate at deep sea hydrothermal vents (0.001–0.002 Pg C year(−1)).
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spelling pubmed-73751252020-07-23 A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments Vasquez‐Cardenas, Diana Meysman, Filip J. R. Boschker, Henricus T. S. Global Biogeochem Cycles Research Articles Dark carbon fixation (DCF) by chemoautotrophic microorganisms can sustain food webs in the seafloor by local production of organic matter independent of photosynthesis. The process has received considerable attention in deep sea systems, such as hydrothermal vents, but the regulation, depth distribution, and global importance of coastal sedimentary DCF have not been systematically investigated. Here we surveyed eight coastal sediments by means of stable isotope probing ((13)C‐DIC) combined with bacterial biomarkers (phospholipid‐derived fatty acids) and compiled additional rates from literature into a global database. DCF rates in coastal sediments range from 0.07 to 36.30 mmol C m(−2) day(−1), and there is a linear relation between DCF and water depth. The CO(2) fixation ratio (DCF/CO(2) respired) also shows a trend with water depth, decreasing from 0.09 in nearshore environments to 0.04 in continental shelf sediments. Five types of depth distributions of chemoautotrophic activity are identified based on the mode of pore water transport (advective, bioturbated, and diffusive) and the dominant pathway of microbial sulfur oxidation. Extrapolated to the global coastal ocean, we estimate a DCF rate of 0.04 to 0.06 Pg C year(−1), which is less than previous estimates based on indirect measurements (0.15 Pg C year(−1)), but remains substantially higher than the global DCF rate at deep sea hydrothermal vents (0.001–0.002 Pg C year(−1)). John Wiley and Sons Inc. 2020-02-19 2020-02 /pmc/articles/PMC7375125/ /pubmed/32713991 http://dx.doi.org/10.1029/2019GB006298 Text en ©2020. The Authors. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Vasquez‐Cardenas, Diana
Meysman, Filip J. R.
Boschker, Henricus T. S.
A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title_full A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title_fullStr A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title_full_unstemmed A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title_short A Cross‐System Comparison of Dark Carbon Fixation in Coastal Sediments
title_sort cross‐system comparison of dark carbon fixation in coastal sediments
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7375125/
https://www.ncbi.nlm.nih.gov/pubmed/32713991
http://dx.doi.org/10.1029/2019GB006298
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