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Label-free detection of rare circulating tumor cells by image analysis and machine learning

Detection and characterization of rare circulating tumor cells (CTCs) in patients' blood is important for the diagnosis and monitoring of cancer. The traditional way of counting CTCs via fluorescent images requires a series of tedious experimental procedures and often impacts the viability of c...

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Autores principales: Wang, Shen, Zhou, Yuyuan, Qin, Xiaochen, Nair, Suresh, Huang, Xiaolei, Liu, Yaling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376046/
https://www.ncbi.nlm.nih.gov/pubmed/32699281
http://dx.doi.org/10.1038/s41598-020-69056-1
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author Wang, Shen
Zhou, Yuyuan
Qin, Xiaochen
Nair, Suresh
Huang, Xiaolei
Liu, Yaling
author_facet Wang, Shen
Zhou, Yuyuan
Qin, Xiaochen
Nair, Suresh
Huang, Xiaolei
Liu, Yaling
author_sort Wang, Shen
collection PubMed
description Detection and characterization of rare circulating tumor cells (CTCs) in patients' blood is important for the diagnosis and monitoring of cancer. The traditional way of counting CTCs via fluorescent images requires a series of tedious experimental procedures and often impacts the viability of cells. Here we present a method for label-free detection of CTCs from patient blood samples, by taking advantage of data analysis of bright field microscopy images. The approach uses the convolutional neural network, a powerful image classification and machine learning algorithm to perform label-free classification of cells detected in microscopic images of patient blood samples containing white blood cells and CTCs. It requires minimal data pre-processing and has an easy experimental setup. Through our experiments, we show that our method can achieve high accuracy on the identification of rare CTCs without the need for advanced devices or expert users, thus providing a faster and simpler way for counting and identifying CTCs. With more data becoming available in the future, the machine learning model can be further improved and can serve as an accurate and easy-to-use tool for CTC analysis.
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spelling pubmed-73760462020-07-24 Label-free detection of rare circulating tumor cells by image analysis and machine learning Wang, Shen Zhou, Yuyuan Qin, Xiaochen Nair, Suresh Huang, Xiaolei Liu, Yaling Sci Rep Article Detection and characterization of rare circulating tumor cells (CTCs) in patients' blood is important for the diagnosis and monitoring of cancer. The traditional way of counting CTCs via fluorescent images requires a series of tedious experimental procedures and often impacts the viability of cells. Here we present a method for label-free detection of CTCs from patient blood samples, by taking advantage of data analysis of bright field microscopy images. The approach uses the convolutional neural network, a powerful image classification and machine learning algorithm to perform label-free classification of cells detected in microscopic images of patient blood samples containing white blood cells and CTCs. It requires minimal data pre-processing and has an easy experimental setup. Through our experiments, we show that our method can achieve high accuracy on the identification of rare CTCs without the need for advanced devices or expert users, thus providing a faster and simpler way for counting and identifying CTCs. With more data becoming available in the future, the machine learning model can be further improved and can serve as an accurate and easy-to-use tool for CTC analysis. Nature Publishing Group UK 2020-07-22 /pmc/articles/PMC7376046/ /pubmed/32699281 http://dx.doi.org/10.1038/s41598-020-69056-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wang, Shen
Zhou, Yuyuan
Qin, Xiaochen
Nair, Suresh
Huang, Xiaolei
Liu, Yaling
Label-free detection of rare circulating tumor cells by image analysis and machine learning
title Label-free detection of rare circulating tumor cells by image analysis and machine learning
title_full Label-free detection of rare circulating tumor cells by image analysis and machine learning
title_fullStr Label-free detection of rare circulating tumor cells by image analysis and machine learning
title_full_unstemmed Label-free detection of rare circulating tumor cells by image analysis and machine learning
title_short Label-free detection of rare circulating tumor cells by image analysis and machine learning
title_sort label-free detection of rare circulating tumor cells by image analysis and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376046/
https://www.ncbi.nlm.nih.gov/pubmed/32699281
http://dx.doi.org/10.1038/s41598-020-69056-1
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