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Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes

BACKGROUND: We have previously isolated Bacillus subtilis HMNig-2 and MENO2 strains, from honey and the honeybee gut microbiome respectively, and demonstrated these strains to produce levansucrase with potential probiotics characteristics. Here we report their complete genome sequence and comparativ...

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Autores principales: Hamdy, Abdelhamid A., Esawy, Mona A., Elattal, Nouran A., Amin, Magdy A., Ali, Amal E., Awad, Ghada E. A., Connerton, Ian, Mansour, Nahla M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376800/
https://www.ncbi.nlm.nih.gov/pubmed/32700263
http://dx.doi.org/10.1186/s43141-020-00050-w
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author Hamdy, Abdelhamid A.
Esawy, Mona A.
Elattal, Nouran A.
Amin, Magdy A.
Ali, Amal E.
Awad, Ghada E. A.
Connerton, Ian
Mansour, Nahla M.
author_facet Hamdy, Abdelhamid A.
Esawy, Mona A.
Elattal, Nouran A.
Amin, Magdy A.
Ali, Amal E.
Awad, Ghada E. A.
Connerton, Ian
Mansour, Nahla M.
author_sort Hamdy, Abdelhamid A.
collection PubMed
description BACKGROUND: We have previously isolated Bacillus subtilis HMNig-2 and MENO2 strains, from honey and the honeybee gut microbiome respectively, and demonstrated these strains to produce levansucrase with potential probiotics characteristics. Here we report their complete genome sequence and comparative analysis with other and other B. subtilis strains. RESULTS: The complete genome sequences of Bacillus subtilis HMNig-2 and MENO2 were de novo assembled from MiSeq paired-end sequence reads and annotated using the RAST tool. Whole-genome alignments were performed to identify functional differences associated with their potential use as probiotics. CONCLUSIONS: The comparative analysis and the availability of the genome sequence of these two strains will provide comprehensive analysis about the diversity of these valuable Bacillus strains and the possible impact of the environment on bacterial evolution. SIGNIFICANCE AND IMPACT OF STUDY: We introduce complete genome sequence of two new B. subtilis strains HMNig-2 and MENO2 with probiotic potential and as cell factories for the production of levan and other valuable components for pharmaceutical and industrial applications
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spelling pubmed-73768002020-08-04 Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes Hamdy, Abdelhamid A. Esawy, Mona A. Elattal, Nouran A. Amin, Magdy A. Ali, Amal E. Awad, Ghada E. A. Connerton, Ian Mansour, Nahla M. J Genet Eng Biotechnol Research BACKGROUND: We have previously isolated Bacillus subtilis HMNig-2 and MENO2 strains, from honey and the honeybee gut microbiome respectively, and demonstrated these strains to produce levansucrase with potential probiotics characteristics. Here we report their complete genome sequence and comparative analysis with other and other B. subtilis strains. RESULTS: The complete genome sequences of Bacillus subtilis HMNig-2 and MENO2 were de novo assembled from MiSeq paired-end sequence reads and annotated using the RAST tool. Whole-genome alignments were performed to identify functional differences associated with their potential use as probiotics. CONCLUSIONS: The comparative analysis and the availability of the genome sequence of these two strains will provide comprehensive analysis about the diversity of these valuable Bacillus strains and the possible impact of the environment on bacterial evolution. SIGNIFICANCE AND IMPACT OF STUDY: We introduce complete genome sequence of two new B. subtilis strains HMNig-2 and MENO2 with probiotic potential and as cell factories for the production of levan and other valuable components for pharmaceutical and industrial applications Springer Berlin Heidelberg 2020-07-22 /pmc/articles/PMC7376800/ /pubmed/32700263 http://dx.doi.org/10.1186/s43141-020-00050-w Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Research
Hamdy, Abdelhamid A.
Esawy, Mona A.
Elattal, Nouran A.
Amin, Magdy A.
Ali, Amal E.
Awad, Ghada E. A.
Connerton, Ian
Mansour, Nahla M.
Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title_full Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title_fullStr Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title_full_unstemmed Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title_short Complete genome sequence and comparative analysis of two potential probiotics Bacillus subtilis isolated from honey and honeybee microbiomes
title_sort complete genome sequence and comparative analysis of two potential probiotics bacillus subtilis isolated from honey and honeybee microbiomes
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7376800/
https://www.ncbi.nlm.nih.gov/pubmed/32700263
http://dx.doi.org/10.1186/s43141-020-00050-w
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