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Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, ph...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377467/ https://www.ncbi.nlm.nih.gov/pubmed/32701993 http://dx.doi.org/10.1371/journal.pone.0236349 |
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author | Nagar, Preeti Kumar, Ashish Jain, Muskan Kumari, Sumita Mustafiz, Ananda |
author_facet | Nagar, Preeti Kumar, Ashish Jain, Muskan Kumari, Sumita Mustafiz, Ananda |
author_sort | Nagar, Preeti |
collection | PubMed |
description | Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, phytosulfokine (PSK). PSK signalling through PSKR promotes normal growth and development and also plays a role in defense responses. Like other RLKs, these PSKRs might have a role in signal transduction pathways related to abiotic stress responses. Genome-wide analysis of phytosulfokine receptor gene family has led to the identification of fifteen putative members in the Oryza sativa genome. The expression analysis of OsPSKR genes done using RNA-seq data, showed that these genes were differentially expressed in different tissues and responded specifically to heat, salt, drought and cold stress. Furthermore, the real-time quantitative PCR for fifteen OsPSKR genes revealed temporally and spatially regulated gene expression corresponding to salinity and drought stress. Our results provide useful information for a better understanding of OsPSKR genes and provide the foundation for additional functional exploration of the rice PSKR gene family in development and stress response. |
format | Online Article Text |
id | pubmed-7377467 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-73774672020-07-27 Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa Nagar, Preeti Kumar, Ashish Jain, Muskan Kumari, Sumita Mustafiz, Ananda PLoS One Research Article Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, phytosulfokine (PSK). PSK signalling through PSKR promotes normal growth and development and also plays a role in defense responses. Like other RLKs, these PSKRs might have a role in signal transduction pathways related to abiotic stress responses. Genome-wide analysis of phytosulfokine receptor gene family has led to the identification of fifteen putative members in the Oryza sativa genome. The expression analysis of OsPSKR genes done using RNA-seq data, showed that these genes were differentially expressed in different tissues and responded specifically to heat, salt, drought and cold stress. Furthermore, the real-time quantitative PCR for fifteen OsPSKR genes revealed temporally and spatially regulated gene expression corresponding to salinity and drought stress. Our results provide useful information for a better understanding of OsPSKR genes and provide the foundation for additional functional exploration of the rice PSKR gene family in development and stress response. Public Library of Science 2020-07-23 /pmc/articles/PMC7377467/ /pubmed/32701993 http://dx.doi.org/10.1371/journal.pone.0236349 Text en © 2020 Nagar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Nagar, Preeti Kumar, Ashish Jain, Muskan Kumari, Sumita Mustafiz, Ananda Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title | Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title_full | Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title_fullStr | Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title_full_unstemmed | Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title_short | Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa |
title_sort | genome-wide analysis and transcript profiling of pskr gene family members in oryza sativa |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377467/ https://www.ncbi.nlm.nih.gov/pubmed/32701993 http://dx.doi.org/10.1371/journal.pone.0236349 |
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