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Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa

Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, ph...

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Autores principales: Nagar, Preeti, Kumar, Ashish, Jain, Muskan, Kumari, Sumita, Mustafiz, Ananda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377467/
https://www.ncbi.nlm.nih.gov/pubmed/32701993
http://dx.doi.org/10.1371/journal.pone.0236349
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author Nagar, Preeti
Kumar, Ashish
Jain, Muskan
Kumari, Sumita
Mustafiz, Ananda
author_facet Nagar, Preeti
Kumar, Ashish
Jain, Muskan
Kumari, Sumita
Mustafiz, Ananda
author_sort Nagar, Preeti
collection PubMed
description Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, phytosulfokine (PSK). PSK signalling through PSKR promotes normal growth and development and also plays a role in defense responses. Like other RLKs, these PSKRs might have a role in signal transduction pathways related to abiotic stress responses. Genome-wide analysis of phytosulfokine receptor gene family has led to the identification of fifteen putative members in the Oryza sativa genome. The expression analysis of OsPSKR genes done using RNA-seq data, showed that these genes were differentially expressed in different tissues and responded specifically to heat, salt, drought and cold stress. Furthermore, the real-time quantitative PCR for fifteen OsPSKR genes revealed temporally and spatially regulated gene expression corresponding to salinity and drought stress. Our results provide useful information for a better understanding of OsPSKR genes and provide the foundation for additional functional exploration of the rice PSKR gene family in development and stress response.
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spelling pubmed-73774672020-07-27 Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa Nagar, Preeti Kumar, Ashish Jain, Muskan Kumari, Sumita Mustafiz, Ananda PLoS One Research Article Peptide signalling is an integral part of cell-to-cell communication which helps to relay the information responsible for coordinating cell proliferation and differentiation. Phytosulfokine Receptor (PSKR) is a transmembrane LRR-RLK family protein with a binding site for small signalling peptide, phytosulfokine (PSK). PSK signalling through PSKR promotes normal growth and development and also plays a role in defense responses. Like other RLKs, these PSKRs might have a role in signal transduction pathways related to abiotic stress responses. Genome-wide analysis of phytosulfokine receptor gene family has led to the identification of fifteen putative members in the Oryza sativa genome. The expression analysis of OsPSKR genes done using RNA-seq data, showed that these genes were differentially expressed in different tissues and responded specifically to heat, salt, drought and cold stress. Furthermore, the real-time quantitative PCR for fifteen OsPSKR genes revealed temporally and spatially regulated gene expression corresponding to salinity and drought stress. Our results provide useful information for a better understanding of OsPSKR genes and provide the foundation for additional functional exploration of the rice PSKR gene family in development and stress response. Public Library of Science 2020-07-23 /pmc/articles/PMC7377467/ /pubmed/32701993 http://dx.doi.org/10.1371/journal.pone.0236349 Text en © 2020 Nagar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nagar, Preeti
Kumar, Ashish
Jain, Muskan
Kumari, Sumita
Mustafiz, Ananda
Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title_full Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title_fullStr Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title_full_unstemmed Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title_short Genome-wide analysis and transcript profiling of PSKR gene family members in Oryza sativa
title_sort genome-wide analysis and transcript profiling of pskr gene family members in oryza sativa
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377467/
https://www.ncbi.nlm.nih.gov/pubmed/32701993
http://dx.doi.org/10.1371/journal.pone.0236349
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