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Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood
Tobacco smoking, a risk factor for several human diseases, can lead to alterations in DNA methylation. Smoking is a key source of cadmium exposure; however, there are limited studies examining DNA methylation alterations following smoking-related cadmium exposure. To identify such cadmium exposure-r...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer US
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7378121/ https://www.ncbi.nlm.nih.gov/pubmed/32347401 http://dx.doi.org/10.1007/s10528-020-09965-y |
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author | Lee, Jae-Eun Kim, Hye-Ryun Lee, Mee-hee Kim, Nam-Hee Wang, Kyoung-Min Lee, Sang-hyeop Park, Ok Hong, Eun-Jung Youn, Jong-Woo Kim, Young-Youl |
author_facet | Lee, Jae-Eun Kim, Hye-Ryun Lee, Mee-hee Kim, Nam-Hee Wang, Kyoung-Min Lee, Sang-hyeop Park, Ok Hong, Eun-Jung Youn, Jong-Woo Kim, Young-Youl |
author_sort | Lee, Jae-Eun |
collection | PubMed |
description | Tobacco smoking, a risk factor for several human diseases, can lead to alterations in DNA methylation. Smoking is a key source of cadmium exposure; however, there are limited studies examining DNA methylation alterations following smoking-related cadmium exposure. To identify such cadmium exposure-related DNA methylation, we performed genome-wide DNA methylation profiling using DNA samples from 50 smokers and 50 non-smokers. We found that a total of 136 CpG sites (including 70 unique genes) were significantly differentially methylated in smokers as compared to that in non-smokers. The CpG site cg05575921 in the AHRR gene was hypomethylated (Δ ß > − 0.2) in smokers, which was in accordance with previous studies. The rs951295 (within RNA gene LOC105370802) and cg00587941 sites were under-methylated by > 15% in smokers, whereas cg11314779 (within CELF6) and cg02126896 were over-methylated by ≥ 15%. We analyzed the association between blood cadmium concentration and DNA methylation level for 50 smokers and 50 non-smokers. DNA methylation rates of 307 CpG sites (including 207 unique genes) were significantly correlated to blood cadmium concentration (linear regression P value < 0.001). The four significant loci (cg05575921 and cg23576855 in AHRR, cg03636183 in F2RL3, and cg21566642) were under-methylated by > 10% in smokers compared to that in non-smokers. In conclusion, our study demonstrated that DNA methylation levels of rs951295, cg00587941, cg11314779, and cg02126896 sites may be new putative indicators of smoking status. Furthermore, we showed that these four loci may be differentially methylated by cadmium exposure due to smoking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10528-020-09965-y) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7378121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-73781212020-08-04 Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood Lee, Jae-Eun Kim, Hye-Ryun Lee, Mee-hee Kim, Nam-Hee Wang, Kyoung-Min Lee, Sang-hyeop Park, Ok Hong, Eun-Jung Youn, Jong-Woo Kim, Young-Youl Biochem Genet Original Article Tobacco smoking, a risk factor for several human diseases, can lead to alterations in DNA methylation. Smoking is a key source of cadmium exposure; however, there are limited studies examining DNA methylation alterations following smoking-related cadmium exposure. To identify such cadmium exposure-related DNA methylation, we performed genome-wide DNA methylation profiling using DNA samples from 50 smokers and 50 non-smokers. We found that a total of 136 CpG sites (including 70 unique genes) were significantly differentially methylated in smokers as compared to that in non-smokers. The CpG site cg05575921 in the AHRR gene was hypomethylated (Δ ß > − 0.2) in smokers, which was in accordance with previous studies. The rs951295 (within RNA gene LOC105370802) and cg00587941 sites were under-methylated by > 15% in smokers, whereas cg11314779 (within CELF6) and cg02126896 were over-methylated by ≥ 15%. We analyzed the association between blood cadmium concentration and DNA methylation level for 50 smokers and 50 non-smokers. DNA methylation rates of 307 CpG sites (including 207 unique genes) were significantly correlated to blood cadmium concentration (linear regression P value < 0.001). The four significant loci (cg05575921 and cg23576855 in AHRR, cg03636183 in F2RL3, and cg21566642) were under-methylated by > 10% in smokers compared to that in non-smokers. In conclusion, our study demonstrated that DNA methylation levels of rs951295, cg00587941, cg11314779, and cg02126896 sites may be new putative indicators of smoking status. Furthermore, we showed that these four loci may be differentially methylated by cadmium exposure due to smoking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10528-020-09965-y) contains supplementary material, which is available to authorized users. Springer US 2020-04-28 2020 /pmc/articles/PMC7378121/ /pubmed/32347401 http://dx.doi.org/10.1007/s10528-020-09965-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Original Article Lee, Jae-Eun Kim, Hye-Ryun Lee, Mee-hee Kim, Nam-Hee Wang, Kyoung-Min Lee, Sang-hyeop Park, Ok Hong, Eun-Jung Youn, Jong-Woo Kim, Young-Youl Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title | Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title_full | Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title_fullStr | Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title_full_unstemmed | Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title_short | Smoking-Related DNA Methylation is Differentially Associated with Cadmium Concentration in Blood |
title_sort | smoking-related dna methylation is differentially associated with cadmium concentration in blood |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7378121/ https://www.ncbi.nlm.nih.gov/pubmed/32347401 http://dx.doi.org/10.1007/s10528-020-09965-y |
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