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Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients
In 2020, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused infections worldwide. However, the correlation between the immune infiltration and coronavirus disease 2019 (COVID-19) susceptibility or severity in cancer patients remains to be fully elucidated. ACE2 expressions in no...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7378636/ https://www.ncbi.nlm.nih.gov/pubmed/32760213 http://dx.doi.org/10.7150/ijbs.48639 |
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author | Huang, Xin He, Chaobin Hua, Xin Kan, Anna Sun, Shuxin Wang, Jun Li, Shengping |
author_facet | Huang, Xin He, Chaobin Hua, Xin Kan, Anna Sun, Shuxin Wang, Jun Li, Shengping |
author_sort | Huang, Xin |
collection | PubMed |
description | In 2020, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused infections worldwide. However, the correlation between the immune infiltration and coronavirus disease 2019 (COVID-19) susceptibility or severity in cancer patients remains to be fully elucidated. ACE2 expressions in normal tissues, cancers and cell lines were comprehensively assessed. Furthermore, we compared ACE2 expression between cancers and matched normal tissues through Gene Expression Profiling Interactive Analysis (GEPIA). In addition, we performed gene set enrichment analysis (GSEA) to investigate the related signaling pathways. Finally, the correlations between ACE2 expression and immune infiltration were investigated via Tumor Immune Estimation Resource (TIMER) and GEPIA. We found that ACE2 was predominantly expressed in both adult and fetal tissues from the digestive, urinary and male reproductive tracts; moreover, ACE2 expressions in corresponding cancers were generally higher than that in matched healthy tissues. GSEA showed that various metabolic and immune-related pathways were significantly associated with ACE2 expression across multiple cancer types. Intriguingly, we found that ACE2 expression correlated significantly with immune cell infiltration in both normal and cancer tissues, especially in the stomach and colon. These findings proposed a possible fecal-oral and maternal-fetal transmission of SARS-CoV-2 and suggested that cancers of the respiratory, digestive or urinary tracts would be more vulnerable to SARS-CoV-2 infection. |
format | Online Article Text |
id | pubmed-7378636 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-73786362020-08-04 Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients Huang, Xin He, Chaobin Hua, Xin Kan, Anna Sun, Shuxin Wang, Jun Li, Shengping Int J Biol Sci Research Paper In 2020, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused infections worldwide. However, the correlation between the immune infiltration and coronavirus disease 2019 (COVID-19) susceptibility or severity in cancer patients remains to be fully elucidated. ACE2 expressions in normal tissues, cancers and cell lines were comprehensively assessed. Furthermore, we compared ACE2 expression between cancers and matched normal tissues through Gene Expression Profiling Interactive Analysis (GEPIA). In addition, we performed gene set enrichment analysis (GSEA) to investigate the related signaling pathways. Finally, the correlations between ACE2 expression and immune infiltration were investigated via Tumor Immune Estimation Resource (TIMER) and GEPIA. We found that ACE2 was predominantly expressed in both adult and fetal tissues from the digestive, urinary and male reproductive tracts; moreover, ACE2 expressions in corresponding cancers were generally higher than that in matched healthy tissues. GSEA showed that various metabolic and immune-related pathways were significantly associated with ACE2 expression across multiple cancer types. Intriguingly, we found that ACE2 expression correlated significantly with immune cell infiltration in both normal and cancer tissues, especially in the stomach and colon. These findings proposed a possible fecal-oral and maternal-fetal transmission of SARS-CoV-2 and suggested that cancers of the respiratory, digestive or urinary tracts would be more vulnerable to SARS-CoV-2 infection. Ivyspring International Publisher 2020-07-06 /pmc/articles/PMC7378636/ /pubmed/32760213 http://dx.doi.org/10.7150/ijbs.48639 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Huang, Xin He, Chaobin Hua, Xin Kan, Anna Sun, Shuxin Wang, Jun Li, Shengping Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title | Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title_full | Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title_fullStr | Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title_full_unstemmed | Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title_short | Bioinformatic Analysis of Correlation between Immune Infiltration and COVID-19 in Cancer Patients |
title_sort | bioinformatic analysis of correlation between immune infiltration and covid-19 in cancer patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7378636/ https://www.ncbi.nlm.nih.gov/pubmed/32760213 http://dx.doi.org/10.7150/ijbs.48639 |
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