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Single Cell RNA-Sequencing for the Study of Atherosclerosis

Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously u...

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Detalles Bibliográficos
Autores principales: Hajkarim, Morteza Chalabi, Won, Kyoung Jae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Lipidology and Atherosclerosis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379113/
https://www.ncbi.nlm.nih.gov/pubmed/32821705
http://dx.doi.org/10.12997/jla.2019.8.2.152
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author Hajkarim, Morteza Chalabi
Won, Kyoung Jae
author_facet Hajkarim, Morteza Chalabi
Won, Kyoung Jae
author_sort Hajkarim, Morteza Chalabi
collection PubMed
description Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously uncharacterized cell populations. scRNAseq is an effective approach to evaluate heterogeneous cell populations by measuring the transcriptomic profiles at the single cell level. Besides the studies of atherosclerosis, scRNAseq is being employed in various areas of biology, including cancer research and organ development. In order to analyze these new massive datasets, various analytic approaches have been developed. This review aims to enhance the understanding of this new technology by exploring how the single cell transcriptome has been applied to the study of atherosclerosis and further discuss potential analysis of using scRNAseq.
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spelling pubmed-73791132020-08-18 Single Cell RNA-Sequencing for the Study of Atherosclerosis Hajkarim, Morteza Chalabi Won, Kyoung Jae J Lipid Atheroscler Review Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously uncharacterized cell populations. scRNAseq is an effective approach to evaluate heterogeneous cell populations by measuring the transcriptomic profiles at the single cell level. Besides the studies of atherosclerosis, scRNAseq is being employed in various areas of biology, including cancer research and organ development. In order to analyze these new massive datasets, various analytic approaches have been developed. This review aims to enhance the understanding of this new technology by exploring how the single cell transcriptome has been applied to the study of atherosclerosis and further discuss potential analysis of using scRNAseq. Korean Society of Lipidology and Atherosclerosis 2019-09 2019-07-30 /pmc/articles/PMC7379113/ /pubmed/32821705 http://dx.doi.org/10.12997/jla.2019.8.2.152 Text en Copyright © 2019 The Korean Society of Lipid and Atherosclerosis. https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Hajkarim, Morteza Chalabi
Won, Kyoung Jae
Single Cell RNA-Sequencing for the Study of Atherosclerosis
title Single Cell RNA-Sequencing for the Study of Atherosclerosis
title_full Single Cell RNA-Sequencing for the Study of Atherosclerosis
title_fullStr Single Cell RNA-Sequencing for the Study of Atherosclerosis
title_full_unstemmed Single Cell RNA-Sequencing for the Study of Atherosclerosis
title_short Single Cell RNA-Sequencing for the Study of Atherosclerosis
title_sort single cell rna-sequencing for the study of atherosclerosis
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379113/
https://www.ncbi.nlm.nih.gov/pubmed/32821705
http://dx.doi.org/10.12997/jla.2019.8.2.152
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