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Single Cell RNA-Sequencing for the Study of Atherosclerosis
Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously u...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society of Lipidology and Atherosclerosis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379113/ https://www.ncbi.nlm.nih.gov/pubmed/32821705 http://dx.doi.org/10.12997/jla.2019.8.2.152 |
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author | Hajkarim, Morteza Chalabi Won, Kyoung Jae |
author_facet | Hajkarim, Morteza Chalabi Won, Kyoung Jae |
author_sort | Hajkarim, Morteza Chalabi |
collection | PubMed |
description | Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously uncharacterized cell populations. scRNAseq is an effective approach to evaluate heterogeneous cell populations by measuring the transcriptomic profiles at the single cell level. Besides the studies of atherosclerosis, scRNAseq is being employed in various areas of biology, including cancer research and organ development. In order to analyze these new massive datasets, various analytic approaches have been developed. This review aims to enhance the understanding of this new technology by exploring how the single cell transcriptome has been applied to the study of atherosclerosis and further discuss potential analysis of using scRNAseq. |
format | Online Article Text |
id | pubmed-7379113 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Korean Society of Lipidology and Atherosclerosis |
record_format | MEDLINE/PubMed |
spelling | pubmed-73791132020-08-18 Single Cell RNA-Sequencing for the Study of Atherosclerosis Hajkarim, Morteza Chalabi Won, Kyoung Jae J Lipid Atheroscler Review Atherosclerosis is a major cause of coronary artery disease and stroke. A massive and new type of data has finally arrived in the field of atherosclerosis: single cell RNA sequencing (scRNAseq). Recently, scRNAseq has been successfully applied to the study of atherosclerosis to identify previously uncharacterized cell populations. scRNAseq is an effective approach to evaluate heterogeneous cell populations by measuring the transcriptomic profiles at the single cell level. Besides the studies of atherosclerosis, scRNAseq is being employed in various areas of biology, including cancer research and organ development. In order to analyze these new massive datasets, various analytic approaches have been developed. This review aims to enhance the understanding of this new technology by exploring how the single cell transcriptome has been applied to the study of atherosclerosis and further discuss potential analysis of using scRNAseq. Korean Society of Lipidology and Atherosclerosis 2019-09 2019-07-30 /pmc/articles/PMC7379113/ /pubmed/32821705 http://dx.doi.org/10.12997/jla.2019.8.2.152 Text en Copyright © 2019 The Korean Society of Lipid and Atherosclerosis. https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Hajkarim, Morteza Chalabi Won, Kyoung Jae Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title | Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title_full | Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title_fullStr | Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title_full_unstemmed | Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title_short | Single Cell RNA-Sequencing for the Study of Atherosclerosis |
title_sort | single cell rna-sequencing for the study of atherosclerosis |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379113/ https://www.ncbi.nlm.nih.gov/pubmed/32821705 http://dx.doi.org/10.12997/jla.2019.8.2.152 |
work_keys_str_mv | AT hajkarimmortezachalabi singlecellrnasequencingforthestudyofatherosclerosis AT wonkyoungjae singlecellrnasequencingforthestudyofatherosclerosis |