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Optimizing ex situ genetic resource collections for European livestock conservation

Ex situ collections offer the potential to reduce extinction risks, affording option to society in maintaining future breeding opportunities for productivity and heritage traits. However, how much should we be seeking to collect and conserve in gene banks, and where? We developed a mathematical mode...

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Autores principales: De Oliveira Silva, Rafael, Ahmadi, Bouda Vosough, Hiemstra, Sipke Joost, Moran, Dominic
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379547/
https://www.ncbi.nlm.nih.gov/pubmed/30536957
http://dx.doi.org/10.1111/jbg.12368
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author De Oliveira Silva, Rafael
Ahmadi, Bouda Vosough
Hiemstra, Sipke Joost
Moran, Dominic
author_facet De Oliveira Silva, Rafael
Ahmadi, Bouda Vosough
Hiemstra, Sipke Joost
Moran, Dominic
author_sort De Oliveira Silva, Rafael
collection PubMed
description Ex situ collections offer the potential to reduce extinction risks, affording option to society in maintaining future breeding opportunities for productivity and heritage traits. However, how much should we be seeking to collect and conserve in gene banks, and where? We developed a mathematical model to optimize logistical decisions of breed conservation choices and to evaluate alternative scenarios for efficiently re‐allocating genetic materials currently stored in different European gene banks, allowing for cross‐country collections, cost and cryogenic capacity differentials. We show how alternative allocations for the breeds that are currently stored in 11 European gene banks could reduce overall conservation costs by around 20% by selecting cryogenic banks that have relatively lower combination of fixed and collection costs, and are geographically closer to collection regions. Our results show that centralizing collections in one gene bank would double the costs, relative to collective European collections approaches. We also calculate marginal costs of collections and show that increasing diversity within the gene banks implies in higher costs per conserved breed.
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spelling pubmed-73795472020-07-24 Optimizing ex situ genetic resource collections for European livestock conservation De Oliveira Silva, Rafael Ahmadi, Bouda Vosough Hiemstra, Sipke Joost Moran, Dominic J Anim Breed Genet Original Articles Ex situ collections offer the potential to reduce extinction risks, affording option to society in maintaining future breeding opportunities for productivity and heritage traits. However, how much should we be seeking to collect and conserve in gene banks, and where? We developed a mathematical model to optimize logistical decisions of breed conservation choices and to evaluate alternative scenarios for efficiently re‐allocating genetic materials currently stored in different European gene banks, allowing for cross‐country collections, cost and cryogenic capacity differentials. We show how alternative allocations for the breeds that are currently stored in 11 European gene banks could reduce overall conservation costs by around 20% by selecting cryogenic banks that have relatively lower combination of fixed and collection costs, and are geographically closer to collection regions. Our results show that centralizing collections in one gene bank would double the costs, relative to collective European collections approaches. We also calculate marginal costs of collections and show that increasing diversity within the gene banks implies in higher costs per conserved breed. John Wiley and Sons Inc. 2018-12-11 2019-01 /pmc/articles/PMC7379547/ /pubmed/30536957 http://dx.doi.org/10.1111/jbg.12368 Text en © 2018 The Authors. Journal of Animal Breeding and Genetics Published by Blackwell Verlag GmbH. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
De Oliveira Silva, Rafael
Ahmadi, Bouda Vosough
Hiemstra, Sipke Joost
Moran, Dominic
Optimizing ex situ genetic resource collections for European livestock conservation
title Optimizing ex situ genetic resource collections for European livestock conservation
title_full Optimizing ex situ genetic resource collections for European livestock conservation
title_fullStr Optimizing ex situ genetic resource collections for European livestock conservation
title_full_unstemmed Optimizing ex situ genetic resource collections for European livestock conservation
title_short Optimizing ex situ genetic resource collections for European livestock conservation
title_sort optimizing ex situ genetic resource collections for european livestock conservation
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7379547/
https://www.ncbi.nlm.nih.gov/pubmed/30536957
http://dx.doi.org/10.1111/jbg.12368
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