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Applying deep learning to right whale photo identification
Photo identification is an important tool for estimating abundance and monitoring population trends over time. However, manually matching photographs to known individuals is time‐consuming. Motivated by recent developments in image recognition, we hosted a data science challenge on the crowdsourcing...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7380036/ https://www.ncbi.nlm.nih.gov/pubmed/30259577 http://dx.doi.org/10.1111/cobi.13226 |
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author | Bogucki, Robert Cygan, Marek Khan, Christin Brangwynne Klimek, Maciej Milczek, Jan Kanty Mucha, Marcin |
author_facet | Bogucki, Robert Cygan, Marek Khan, Christin Brangwynne Klimek, Maciej Milczek, Jan Kanty Mucha, Marcin |
author_sort | Bogucki, Robert |
collection | PubMed |
description | Photo identification is an important tool for estimating abundance and monitoring population trends over time. However, manually matching photographs to known individuals is time‐consuming. Motivated by recent developments in image recognition, we hosted a data science challenge on the crowdsourcing platform Kaggle to automate the identification of endangered North Atlantic right whales (Eubalaena glacialis). The winning solution automatically identified individual whales with 87% accuracy with a series of convolutional neural networks to identify the region of interest on an image, rotate, crop, and create standardized photographs of uniform size and orientation and then identify the correct individual whale from these passport‐like photographs. Recent advances in deep learning coupled with this fully automated workflow have yielded impressive results and have the potential to revolutionize traditional methods for the collection of data on the abundance and distribution of wild populations. Presenting these results to a broad audience should further bridge the gap between the data science and conservation science communities. |
format | Online Article Text |
id | pubmed-7380036 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73800362020-07-27 Applying deep learning to right whale photo identification Bogucki, Robert Cygan, Marek Khan, Christin Brangwynne Klimek, Maciej Milczek, Jan Kanty Mucha, Marcin Conserv Biol Conservation Methods Photo identification is an important tool for estimating abundance and monitoring population trends over time. However, manually matching photographs to known individuals is time‐consuming. Motivated by recent developments in image recognition, we hosted a data science challenge on the crowdsourcing platform Kaggle to automate the identification of endangered North Atlantic right whales (Eubalaena glacialis). The winning solution automatically identified individual whales with 87% accuracy with a series of convolutional neural networks to identify the region of interest on an image, rotate, crop, and create standardized photographs of uniform size and orientation and then identify the correct individual whale from these passport‐like photographs. Recent advances in deep learning coupled with this fully automated workflow have yielded impressive results and have the potential to revolutionize traditional methods for the collection of data on the abundance and distribution of wild populations. Presenting these results to a broad audience should further bridge the gap between the data science and conservation science communities. John Wiley and Sons Inc. 2018-11-28 2019-06 /pmc/articles/PMC7380036/ /pubmed/30259577 http://dx.doi.org/10.1111/cobi.13226 Text en © 2018 The Authors. Conservation Biology published by Wiley Periodicals, Inc. on behalf of Society for Conservation Biology. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Conservation Methods Bogucki, Robert Cygan, Marek Khan, Christin Brangwynne Klimek, Maciej Milczek, Jan Kanty Mucha, Marcin Applying deep learning to right whale photo identification |
title | Applying deep learning to right whale photo identification |
title_full | Applying deep learning to right whale photo identification |
title_fullStr | Applying deep learning to right whale photo identification |
title_full_unstemmed | Applying deep learning to right whale photo identification |
title_short | Applying deep learning to right whale photo identification |
title_sort | applying deep learning to right whale photo identification |
topic | Conservation Methods |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7380036/ https://www.ncbi.nlm.nih.gov/pubmed/30259577 http://dx.doi.org/10.1111/cobi.13226 |
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