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Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella violacea Guichenot, 1848 (Perciformes, Centrolophidae)
Seriolella violacea Guichenot, 1848 is an important component of the fish fauna of the Chilean coast and is of great economic interest. Cytogenetic information for the family Centrolophidae is lacking and the genomic size of five of the twenty-eight species described for this family are is barely kn...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7381430/ https://www.ncbi.nlm.nih.gov/pubmed/32754305 http://dx.doi.org/10.3897/CompCytogen.v14i3.53087 |
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author | Araya-Jaime, Cristian Palma-Rojas, Claudio Brand, Elisabeth Von Silva, Alfonso |
author_facet | Araya-Jaime, Cristian Palma-Rojas, Claudio Brand, Elisabeth Von Silva, Alfonso |
author_sort | Araya-Jaime, Cristian |
collection | PubMed |
description | Seriolella violacea Guichenot, 1848 is an important component of the fish fauna of the Chilean coast and is of great economic interest. Cytogenetic information for the family Centrolophidae is lacking and the genomic size of five of the twenty-eight species described for this family are is barely known. This study aimed to describe for the first time the karyotype structure via classical and molecular cytogenetics analysis with the goal of identifying the constitutive heterochromatin distribution, chromosome organization of rDNA sequences and quantification of nuclear DNA content. The karyotype of S. violacea is composed of 48 chromosomes, with the presence of conspicuous blocks of heterochromatin on chromosomal pairs one and two. FISH assay with a 5S rDNA probe, revealed the presence of fluorescent markings on the heterochromatic block of pair one. The 18S rDNA sites are located exclusively on pair two, characterizing this pair as the carrier of the NOR. Finally, the genomic size of S. violacea was estimated at 0.59 pg of DNA as C-value. This work represents the first effort to document the karyotype structure and physical organization of the rDNA sequences in the Seriolella genome, contributing with new information to improve our understanding of chromosomal evolution and genomic organization in marine perciforms. |
format | Online Article Text |
id | pubmed-7381430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-73814302020-08-03 Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella violacea Guichenot, 1848 (Perciformes, Centrolophidae) Araya-Jaime, Cristian Palma-Rojas, Claudio Brand, Elisabeth Von Silva, Alfonso Comp Cytogenet Research Article Seriolella violacea Guichenot, 1848 is an important component of the fish fauna of the Chilean coast and is of great economic interest. Cytogenetic information for the family Centrolophidae is lacking and the genomic size of five of the twenty-eight species described for this family are is barely known. This study aimed to describe for the first time the karyotype structure via classical and molecular cytogenetics analysis with the goal of identifying the constitutive heterochromatin distribution, chromosome organization of rDNA sequences and quantification of nuclear DNA content. The karyotype of S. violacea is composed of 48 chromosomes, with the presence of conspicuous blocks of heterochromatin on chromosomal pairs one and two. FISH assay with a 5S rDNA probe, revealed the presence of fluorescent markings on the heterochromatic block of pair one. The 18S rDNA sites are located exclusively on pair two, characterizing this pair as the carrier of the NOR. Finally, the genomic size of S. violacea was estimated at 0.59 pg of DNA as C-value. This work represents the first effort to document the karyotype structure and physical organization of the rDNA sequences in the Seriolella genome, contributing with new information to improve our understanding of chromosomal evolution and genomic organization in marine perciforms. Pensoft Publishers 2020-07-14 /pmc/articles/PMC7381430/ /pubmed/32754305 http://dx.doi.org/10.3897/CompCytogen.v14i3.53087 Text en Cristian Araya-Jaime, Claudio Palma-Rojas, Elisabeth Von Brand, Alfonso Silva http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Araya-Jaime, Cristian Palma-Rojas, Claudio Brand, Elisabeth Von Silva, Alfonso Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title | Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella
violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title_full | Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella
violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title_fullStr | Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella
violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title_full_unstemmed | Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella
violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title_short | Cytogenetic characterization, rDNA mapping and quantification of the nuclear DNA content in Seriolella
violacea Guichenot, 1848 (Perciformes, Centrolophidae) |
title_sort | cytogenetic characterization, rdna mapping and quantification of the nuclear dna content in seriolella
violacea guichenot, 1848 (perciformes, centrolophidae) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7381430/ https://www.ncbi.nlm.nih.gov/pubmed/32754305 http://dx.doi.org/10.3897/CompCytogen.v14i3.53087 |
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