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Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers

1. Accurate estimates of animal diet composition are essential to untangle complex interactions in food webs. Biomarkers and molecular tools are increasingly used to estimate diet, sometimes alongside traditional dietary tracing methods. Yet only a few empirical studies have compared the outcomes an...

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Autores principales: Bonin, Michaël, Dussault, Christian, Taillon, Joëlle, Lecomte, Nicolas, Côté, Steeve D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7381590/
https://www.ncbi.nlm.nih.gov/pubmed/32724540
http://dx.doi.org/10.1002/ece3.6397
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author Bonin, Michaël
Dussault, Christian
Taillon, Joëlle
Lecomte, Nicolas
Côté, Steeve D.
author_facet Bonin, Michaël
Dussault, Christian
Taillon, Joëlle
Lecomte, Nicolas
Côté, Steeve D.
author_sort Bonin, Michaël
collection PubMed
description 1. Accurate estimates of animal diet composition are essential to untangle complex interactions in food webs. Biomarkers and molecular tools are increasingly used to estimate diet, sometimes alongside traditional dietary tracing methods. Yet only a few empirical studies have compared the outcomes and potential gains of using a combination of these methods, especially using free‐ranging animals with distinct foraging preferences. 2. We used stable isotopes, morphological, and molecular analyses to investigate the diet of free‐ranging consumers with two distinct diet types, that is, carnivore and omnivore. By combining the three analytical methods to assess the diet of consumers during the same period, we aimed to identify the limits of each method and to assess the potential benefits of their combined use to derive diet estimates. 3. Our results showed that the different methods led to a consistent diet description for carnivores, which have a relatively simple diet mixture, but their outcomes somewhat differed for omnivore, which have a more complex diet. Still, the combined use of morphological and molecular analyses enhanced the diversity of food sources detected compared to the use of a single method independently of diet types. Precision of diet estimates derived from stable isotope analyses was improved by the addition of priors obtained from morphological and molecular diet analyses of the same population. 4. Although we used free‐ranging animals without a known diet, our empirical testing of three of the most widely used methods of diet determination highlights the limits of relying over a single approach, especially in systems with few or no a priori information about the foraging habits of consumers. The choice of an appropriate approach of diet description should be a key step when planning dietary studies of free‐ranging populations. We recommend using more than one dietary determination methods especially for species with complex diet mixtures.
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spelling pubmed-73815902020-07-27 Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers Bonin, Michaël Dussault, Christian Taillon, Joëlle Lecomte, Nicolas Côté, Steeve D. Ecol Evol Original Research 1. Accurate estimates of animal diet composition are essential to untangle complex interactions in food webs. Biomarkers and molecular tools are increasingly used to estimate diet, sometimes alongside traditional dietary tracing methods. Yet only a few empirical studies have compared the outcomes and potential gains of using a combination of these methods, especially using free‐ranging animals with distinct foraging preferences. 2. We used stable isotopes, morphological, and molecular analyses to investigate the diet of free‐ranging consumers with two distinct diet types, that is, carnivore and omnivore. By combining the three analytical methods to assess the diet of consumers during the same period, we aimed to identify the limits of each method and to assess the potential benefits of their combined use to derive diet estimates. 3. Our results showed that the different methods led to a consistent diet description for carnivores, which have a relatively simple diet mixture, but their outcomes somewhat differed for omnivore, which have a more complex diet. Still, the combined use of morphological and molecular analyses enhanced the diversity of food sources detected compared to the use of a single method independently of diet types. Precision of diet estimates derived from stable isotope analyses was improved by the addition of priors obtained from morphological and molecular diet analyses of the same population. 4. Although we used free‐ranging animals without a known diet, our empirical testing of three of the most widely used methods of diet determination highlights the limits of relying over a single approach, especially in systems with few or no a priori information about the foraging habits of consumers. The choice of an appropriate approach of diet description should be a key step when planning dietary studies of free‐ranging populations. We recommend using more than one dietary determination methods especially for species with complex diet mixtures. John Wiley and Sons Inc. 2020-05-27 /pmc/articles/PMC7381590/ /pubmed/32724540 http://dx.doi.org/10.1002/ece3.6397 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Bonin, Michaël
Dussault, Christian
Taillon, Joëlle
Lecomte, Nicolas
Côté, Steeve D.
Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title_full Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title_fullStr Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title_full_unstemmed Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title_short Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
title_sort combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7381590/
https://www.ncbi.nlm.nih.gov/pubmed/32724540
http://dx.doi.org/10.1002/ece3.6397
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