Cargando…

A high-quality reference genome for cabbage obtained with SMRT reveals novel genomic features and evolutionary characteristics

Cabbage (Brassica oleracea var. capitata) is an important vegetable crop widely grown throughout the world, providing plentiful nutrients and health-promoting substances. To facilitate further genetics and genomic studies and crop improvement, we present here a high-quality reference genome for cabb...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lv, Honghao, Wang, Yong, Han, Fengqing, Ji, Jialei, Fang, Zhiyuan, Zhuang, Mu, Li, Zhansheng, Zhang, Yangyong, Yang, Limei
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7381634/ https://www.ncbi.nlm.nih.gov/pubmed/32709963 http://dx.doi.org/10.1038/s41598-020-69389-x

Ejemplares similares

Genome-wide identification and characterization of non-specific lipid transfer proteins in cabbage
por: Ji, Jialei, et al.
Publicado: (2018)

iTRAQ-Based Proteomic Analysis of Ogura-CMS Cabbage and Its Maintainer Line
por: Han, Fengqing, et al.
Publicado: (2018)

Whole-Genome Mapping Reveals Novel QTL Clusters Associated with Main Agronomic Traits of Cabbage (Brassica oleracea var. capitata L.)
por: Lv, Honghao, et al.
Publicado: (2016)

Carotenoid Biosynthetic Genes in Cabbage: Genome-Wide Identification, Evolution, and Expression Analysis
por: Cao, Wenxue, et al.
Publicado: (2021)

Genome-wide indel/SSR scanning reveals significant loci associated with excellent agronomic traits of a cabbage (Brassica oleracea) elite parental line ‘01–20’
por: Lv, Honghao, et al.
Publicado: (2017)

Overcoming Cabbage Crossing Incompatibility by the Development and Application of Self-Compatibility-QTL- Specific Markers and Genome-Wide Background Analysis
por: Xiao, Zhiliang, et al.
Publicado: (2019)

Rapid Introgression of the Fusarium Wilt Resistance Gene into an Elite Cabbage Line through the Combined Application of a Microspore Culture, Genome Background Analysis, and Disease Resistance-Specific Marker Assisted Foreground Selection
por: Liu, Xing, et al.
Publicado: (2017)

Glucosinolate Biosynthetic Genes of Cabbage: Genome-Wide Identification, Evolution, and Expression Analysis
por: Wang, Peng, et al.
Publicado: (2023)

Comparative Analysis of Genome Wide DNA Methylation Profiles for the Genic Male Sterile Cabbage Line 01-20S and Its Maintainer Line
por: Han, Fengqing, et al.
Publicado: (2017)

Differentially Expressed Genes Associated with the Cabbage Yellow-Green-Leaf Mutant in the ygl-1 Mapping Interval with Recombination Suppression
por: Liu, Xiaoping, et al.
Publicado: (2018)

A Whole-Genome Assembly for Hyaloperonospora parasitica, A Pathogen Causing Downy Mildew in Cabbage (Brassica oleracea var. capitata L.)
por: Wu, Yuankang, et al.
Publicado: (2023)

Transcriptome Analysis Reveals Key Genes and Pathways Associated with the Petal Color Formation in Cabbage (Brassica oleracea L. var. capitata)
por: Zhang, Bin, et al.
Publicado: (2022)

Comparative Transcriptome Analysis between Broccoli (Brassica oleracea var. italica) and Wild Cabbage (Brassica macrocarpa Guss.) in Response to Plasmodiophora brassicae during Different Infection Stages
por: Zhang, Xiaoli, et al.
Publicado: (2016)

Global Survey of the Full-Length Cabbage Transcriptome (Brassica oleracea Var. capitata L.) Reveals Key Alternative Splicing Events Involved in Growth and Disease Response
por: Wang, Yong, et al.
Publicado: (2021)

BoGDB: An integrative genomic database for Brassica oleracea L.
por: Wang, Yong, et al.
Publicado: (2022)

Genetic Diversity and Population Structure of the Xanthomonas campestris pv. campestris Strains Affecting Cabbages in China Revealed by MLST and Rep-PCR Based Genotyping
por: Chen, Guo, et al.
Publicado: (2021)

Genome-wide analysis of HSP70 family genes in cabbage (Brassica oleracea var. capitata) reveals their involvement in floral development
por: Su, Henan, et al.
Publicado: (2019)

QTL Analysis of Head Splitting Resistance in Cabbage (Brassica oleracea L. var. capitata) Using SSR and InDel Makers Based on Whole-Genome Re-Sequencing
por: Su, Yanbin, et al.
Publicado: (2015)

Chromosome Doubling of Microspore-Derived Plants from Cabbage (Brassica oleracea var. capitata L.) and Broccoli (Brassica oleracea var. italica L.)
por: Yuan, Suxia, et al.
Publicado: (2015)

Fine mapping of the major QTLs for biochemical variation of sulforaphane in broccoli florets using a DH population
por: Li, Zhansheng, et al.
Publicado: (2021)

Introgression of clubroot resistant gene into Brassica oleracea L. from Brassica rapa based on homoeologous exchange
por: Zhu, Mingzhao, et al.
Publicado: (2022)

Transcriptome Analysis Reveals Key Genes and Pathways Associated with the Regulation of Flowering Time in Cabbage (Brassica oleracea L. var. capitata)
por: Wang, Jiao, et al.
Publicado: (2023)

Genetic mapping and candidate gene identification of BoGL5, a gene essential for cuticular wax biosynthesis in broccoli
por: Han, Fengqing, et al.
Publicado: (2021)

Fine-Mapping and Analysis of Cgl1, a Gene Conferring Glossy Trait in Cabbage (Brassica oleracea L. var. capitata)
por: Liu, Zezhou, et al.
Publicado: (2017)

Fine Mapping and Transcriptome Analysis Reveal Candidate Genes Associated with Hybrid Lethality in Cabbage (Brassica Oleracea)
por: Xiao, Zhiliang, et al.
Publicado: (2017)

Cgl2 plays an essential role in cuticular wax biosynthesis in cabbage (Brassica oleracea L. var. capitata)
por: Liu, Dongming, et al.
Publicado: (2017)

Comparative Transcriptome Analysis Reveals a Potential Regulatory Network for Ogura Cytoplasmic Male Sterility in Cabbage (Brassica oleracea L.)
por: Chen, Li, et al.
Publicado: (2023)

An Identification System Targeting the SRK Gene for Selecting S-Haplotypes and Self-Compatible Lines in Cabbage
por: Chen, Wendi, et al.
Publicado: (2022)

Resource Screening and Inheritance Analysis of Fusarium oxysporum sp. conglutinans Race 2 Resistance in Cabbage (Brassica oleracea var. capitata)
por: Tong, Long, et al.
Publicado: (2022)

Global DNA Methylation and mRNA-miRNA Variations Activated by Heat Shock Boost Early Microspore Embryogenesis in Cabbage (Brassica oleracea)
por: Kong, Congcong, et al.
Publicado: (2022)

In vivo maternal haploid induction based on genome editing of DMP in Brassica oleracea
por: Zhao, Xinyu, et al.
Publicado: (2022)

Draft Genome Sequence of FGL03-6, a Race 1 Strain of Fusarium oxysporum f. sp. conglutinans, the Causal Agent of Cabbage Fusarium Wilt
por: Lv, Honghao, et al.
Publicado: (2018)

Genome-wide identification and expression analysis of the Brassica oleracea L. chitin-binding genes and response to pathogens infections
por: Zhu, Mingzhao, et al.
Publicado: (2021)

Plant SWEET Family of Sugar Transporters: Structure, Evolution and Biological Functions
por: Ji, Jialei, et al.
Publicado: (2022)

Genetic Diversity, Virulence, Race Profiling, and Comparative Genomic Analysis of the Fusarium oxysporum f. sp. conglutinans Strains Infecting Cabbages in China
por: Liu, Xing, et al.
Publicado: (2019)

Transcriptome reveals the gene expression patterns of sulforaphane metabolism in broccoli florets
por: Li, Zhansheng, et al.
Publicado: (2019)

Organelle Comparative Genome Analysis Reveals Novel Alloplasmic Male Sterility with orf112 in Brassica oleracea L.
por: Chen, Li, et al.
Publicado: (2021)

Map-based cloning and characterization of BoCCD4, a gene responsible for white/yellow petal color in B. oleracea
por: Han, Fengqing, et al.
Publicado: (2019)

Organelle Simple Sequence Repeat Markers Help to Distinguish Carpelloid Stamen and Normal Cytoplasmic Male Sterile Sources in Broccoli
por: Shu, Jinshuai, et al.
Publicado: (2015)

Normal and Abortive Buds Transcriptomic Profiling of Broccoli ogu Cytoplasmic Male Sterile Line and Its Maintainer
por: Shu, Jinshuai, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_glt7t66r0hmg70v0e58ohgc8t3