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Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank

Age-related hearing impairment (ARHI) is very common in older adults and has major impact on quality of life. The heritability of ARHI has been estimated to be around 50%. The present study aimed to estimate heritability and environmental contributions to liability of ARHI and the extent to which a...

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Autores principales: Cherny, Stacey S., Livshits, Gregory, Wells, Helena R. R., Freidin, Maxim B., Malkin, Ida, Dawson, Sally J., Williams, Frances M. K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7382483/
https://www.ncbi.nlm.nih.gov/pubmed/32203203
http://dx.doi.org/10.1038/s41431-020-0603-2
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author Cherny, Stacey S.
Livshits, Gregory
Wells, Helena R. R.
Freidin, Maxim B.
Malkin, Ida
Dawson, Sally J.
Williams, Frances M. K.
author_facet Cherny, Stacey S.
Livshits, Gregory
Wells, Helena R. R.
Freidin, Maxim B.
Malkin, Ida
Dawson, Sally J.
Williams, Frances M. K.
author_sort Cherny, Stacey S.
collection PubMed
description Age-related hearing impairment (ARHI) is very common in older adults and has major impact on quality of life. The heritability of ARHI has been estimated to be around 50%. The present study aimed to estimate heritability and environmental contributions to liability of ARHI and the extent to which a polygenic risk score (PRS) derived from a recent genome-wide association study of questionnaire items regarding hearing loss using the UK Biobank is predictive of hearing loss in other samples. We examined (1) a sample from TwinsUK who have had hearing ability measured by pure-tone audiogram and the speech-to-noise ratio test as well as questionnaire measures that are comparable with the UK Biobank questionnaire items and (2) European and non-European samples from the UK Biobank which were not part of the original GWAS. Results indicated that the questionnaire items were over 50% heritable in TwinsUK and comparable with the objective hearing measures. In addition, we found very high genetic correlation (0.30–0.84) between the questionnaire responses and objective hearing measures in the TwinsUK sample. Finally, PRS computed from weighted UK Biobank GWAS results were predictive of both questionnaire and objective measures of hearing loss in the TwinsUK sample, as well as questionnaire-measured hearing loss in Europeans but not non-European subpopulations. These results demonstrate the utility of questionnaire-based methods in genetic association studies of hearing loss in adults and highlight the differences in genetic predisposition to ARHI by ethnic background.
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spelling pubmed-73824832020-07-28 Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank Cherny, Stacey S. Livshits, Gregory Wells, Helena R. R. Freidin, Maxim B. Malkin, Ida Dawson, Sally J. Williams, Frances M. K. Eur J Hum Genet Article Age-related hearing impairment (ARHI) is very common in older adults and has major impact on quality of life. The heritability of ARHI has been estimated to be around 50%. The present study aimed to estimate heritability and environmental contributions to liability of ARHI and the extent to which a polygenic risk score (PRS) derived from a recent genome-wide association study of questionnaire items regarding hearing loss using the UK Biobank is predictive of hearing loss in other samples. We examined (1) a sample from TwinsUK who have had hearing ability measured by pure-tone audiogram and the speech-to-noise ratio test as well as questionnaire measures that are comparable with the UK Biobank questionnaire items and (2) European and non-European samples from the UK Biobank which were not part of the original GWAS. Results indicated that the questionnaire items were over 50% heritable in TwinsUK and comparable with the objective hearing measures. In addition, we found very high genetic correlation (0.30–0.84) between the questionnaire responses and objective hearing measures in the TwinsUK sample. Finally, PRS computed from weighted UK Biobank GWAS results were predictive of both questionnaire and objective measures of hearing loss in the TwinsUK sample, as well as questionnaire-measured hearing loss in Europeans but not non-European subpopulations. These results demonstrate the utility of questionnaire-based methods in genetic association studies of hearing loss in adults and highlight the differences in genetic predisposition to ARHI by ethnic background. Springer International Publishing 2020-03-20 2020-08 /pmc/articles/PMC7382483/ /pubmed/32203203 http://dx.doi.org/10.1038/s41431-020-0603-2 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Cherny, Stacey S.
Livshits, Gregory
Wells, Helena R. R.
Freidin, Maxim B.
Malkin, Ida
Dawson, Sally J.
Williams, Frances M. K.
Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title_full Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title_fullStr Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title_full_unstemmed Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title_short Self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from UK Biobank
title_sort self-reported hearing loss questions provide a good measure for genetic studies: a polygenic risk score analysis from uk biobank
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7382483/
https://www.ncbi.nlm.nih.gov/pubmed/32203203
http://dx.doi.org/10.1038/s41431-020-0603-2
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