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Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities

With the trend of moving molecular tests from clinical laboratories to on-site testing, there is a need for nucleic acid based diagnostic tools combining the sensitivity, specificity and flexibility of established diagnostics with the ease, cost effectiveness and speed of isothermal amplification an...

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Autores principales: van Dongen, Jeanne E., Berendsen, Johanna T.W., Steenbergen, Renske D.M., Wolthuis, Rob M.F., Eijkel, Jan C.T., Segerink, Loes I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7382963/
https://www.ncbi.nlm.nih.gov/pubmed/32758911
http://dx.doi.org/10.1016/j.bios.2020.112445
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author van Dongen, Jeanne E.
Berendsen, Johanna T.W.
Steenbergen, Renske D.M.
Wolthuis, Rob M.F.
Eijkel, Jan C.T.
Segerink, Loes I.
author_facet van Dongen, Jeanne E.
Berendsen, Johanna T.W.
Steenbergen, Renske D.M.
Wolthuis, Rob M.F.
Eijkel, Jan C.T.
Segerink, Loes I.
author_sort van Dongen, Jeanne E.
collection PubMed
description With the trend of moving molecular tests from clinical laboratories to on-site testing, there is a need for nucleic acid based diagnostic tools combining the sensitivity, specificity and flexibility of established diagnostics with the ease, cost effectiveness and speed of isothermal amplification and detection methods. A promising new nucleic acid detection method is Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated nuclease (Cas)-based sensing. In this method Cas effector proteins are used as highly specific sequence recognition elements that can be combined with many different read-out methods for on-site point-of-care testing. This review covers the technical aspects of integrating CRISPR/Cas technology in miniaturized sensors for analysis on-site. We start with a short introduction to CRISPR/Cas systems and the different effector proteins and continue with reviewing the recent developments of integrating CRISPR sensing in miniaturized sensors for point-of-care applications. Finally, we discuss the challenges of point-of-care CRISPR sensing and describe future research perspectives.
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spelling pubmed-73829632020-07-28 Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities van Dongen, Jeanne E. Berendsen, Johanna T.W. Steenbergen, Renske D.M. Wolthuis, Rob M.F. Eijkel, Jan C.T. Segerink, Loes I. Biosens Bioelectron Article With the trend of moving molecular tests from clinical laboratories to on-site testing, there is a need for nucleic acid based diagnostic tools combining the sensitivity, specificity and flexibility of established diagnostics with the ease, cost effectiveness and speed of isothermal amplification and detection methods. A promising new nucleic acid detection method is Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated nuclease (Cas)-based sensing. In this method Cas effector proteins are used as highly specific sequence recognition elements that can be combined with many different read-out methods for on-site point-of-care testing. This review covers the technical aspects of integrating CRISPR/Cas technology in miniaturized sensors for analysis on-site. We start with a short introduction to CRISPR/Cas systems and the different effector proteins and continue with reviewing the recent developments of integrating CRISPR sensing in miniaturized sensors for point-of-care applications. Finally, we discuss the challenges of point-of-care CRISPR sensing and describe future research perspectives. Elsevier B.V. 2020-10-15 2020-07-26 /pmc/articles/PMC7382963/ /pubmed/32758911 http://dx.doi.org/10.1016/j.bios.2020.112445 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
van Dongen, Jeanne E.
Berendsen, Johanna T.W.
Steenbergen, Renske D.M.
Wolthuis, Rob M.F.
Eijkel, Jan C.T.
Segerink, Loes I.
Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title_full Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title_fullStr Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title_full_unstemmed Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title_short Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities
title_sort point-of-care crispr/cas nucleic acid detection: recent advances, challenges and opportunities
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7382963/
https://www.ncbi.nlm.nih.gov/pubmed/32758911
http://dx.doi.org/10.1016/j.bios.2020.112445
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