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Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers

Automatic monitoring of biodiversity by acoustic sensors has become an indispensable tool to assess environmental stress at an early stage. Due to the difficulty in recognizing the Amazon’s high acoustic diversity and the large amounts of raw audio data recorded by the sensors, the labeling and manu...

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Detalles Bibliográficos
Autores principales: Colonna, Juan G., Carvalho, José R. H., Rosso, Osvaldo A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7384625/
https://www.ncbi.nlm.nih.gov/pubmed/32716981
http://dx.doi.org/10.1371/journal.pone.0229425
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author Colonna, Juan G.
Carvalho, José R. H.
Rosso, Osvaldo A.
author_facet Colonna, Juan G.
Carvalho, José R. H.
Rosso, Osvaldo A.
author_sort Colonna, Juan G.
collection PubMed
description Automatic monitoring of biodiversity by acoustic sensors has become an indispensable tool to assess environmental stress at an early stage. Due to the difficulty in recognizing the Amazon’s high acoustic diversity and the large amounts of raw audio data recorded by the sensors, the labeling and manual inspection of this data is not feasible. Therefore, we propose an ecoacoustic index that allows us to quantify the complexity of an audio segment and correlate this measure with the biodiversity of the soundscape. The approach uses unsupervised methods to avoid the problem of labeling each species individually. The proposed index, named the Ecoacoustic Global Complexity Index (EGCI), makes use of Entropy, Divergence and Statistical Complexity. A distinguishing feature of this index is the mapping of each audio segment, including those of varied lengths, as a single point in a 2D-plane, supporting us in understanding the ecoacoustic dynamics of the rainforest. The main results show a regularity in the ecoacoustic richness of a floodplain, considering different temporal granularities, be it between hours of the day or between consecutive days of the monitoring program. We observed that this regularity does a good job of characterizing the soundscape of the environmental protection area of Mamirauá, in the Amazon, differentiating between species richness and environmental phenomena.
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spelling pubmed-73846252020-08-05 Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers Colonna, Juan G. Carvalho, José R. H. Rosso, Osvaldo A. PLoS One Research Article Automatic monitoring of biodiversity by acoustic sensors has become an indispensable tool to assess environmental stress at an early stage. Due to the difficulty in recognizing the Amazon’s high acoustic diversity and the large amounts of raw audio data recorded by the sensors, the labeling and manual inspection of this data is not feasible. Therefore, we propose an ecoacoustic index that allows us to quantify the complexity of an audio segment and correlate this measure with the biodiversity of the soundscape. The approach uses unsupervised methods to avoid the problem of labeling each species individually. The proposed index, named the Ecoacoustic Global Complexity Index (EGCI), makes use of Entropy, Divergence and Statistical Complexity. A distinguishing feature of this index is the mapping of each audio segment, including those of varied lengths, as a single point in a 2D-plane, supporting us in understanding the ecoacoustic dynamics of the rainforest. The main results show a regularity in the ecoacoustic richness of a floodplain, considering different temporal granularities, be it between hours of the day or between consecutive days of the monitoring program. We observed that this regularity does a good job of characterizing the soundscape of the environmental protection area of Mamirauá, in the Amazon, differentiating between species richness and environmental phenomena. Public Library of Science 2020-07-27 /pmc/articles/PMC7384625/ /pubmed/32716981 http://dx.doi.org/10.1371/journal.pone.0229425 Text en © 2020 Colonna et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Colonna, Juan G.
Carvalho, José R. H.
Rosso, Osvaldo A.
Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title_full Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title_fullStr Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title_full_unstemmed Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title_short Estimating ecoacoustic activity in the Amazon rainforest through Information Theory quantifiers
title_sort estimating ecoacoustic activity in the amazon rainforest through information theory quantifiers
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7384625/
https://www.ncbi.nlm.nih.gov/pubmed/32716981
http://dx.doi.org/10.1371/journal.pone.0229425
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