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Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs

This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients...

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Autores principales: Zhu, Jocelyn, Shen, Beiyi, Abbasi, Almas, Hoshmand-Kochi, Mahsa, Li, Haifang, Duong, Tim Q.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386587/
https://www.ncbi.nlm.nih.gov/pubmed/32722697
http://dx.doi.org/10.1371/journal.pone.0236621
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author Zhu, Jocelyn
Shen, Beiyi
Abbasi, Almas
Hoshmand-Kochi, Mahsa
Li, Haifang
Duong, Tim Q.
author_facet Zhu, Jocelyn
Shen, Beiyi
Abbasi, Almas
Hoshmand-Kochi, Mahsa
Li, Haifang
Duong, Tim Q.
author_sort Zhu, Jocelyn
collection PubMed
description This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0–3) and geographic extent (0–4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0–6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0–8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss’ Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R(2)) of 0.90 (range: 0.73–0.90 for traditional learning and 0.83–0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2–21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation.
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spelling pubmed-73865872020-08-05 Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs Zhu, Jocelyn Shen, Beiyi Abbasi, Almas Hoshmand-Kochi, Mahsa Li, Haifang Duong, Tim Q. PLoS One Research Article This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0–3) and geographic extent (0–4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0–6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0–8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss’ Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R(2)) of 0.90 (range: 0.73–0.90 for traditional learning and 0.83–0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2–21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation. Public Library of Science 2020-07-28 /pmc/articles/PMC7386587/ /pubmed/32722697 http://dx.doi.org/10.1371/journal.pone.0236621 Text en © 2020 Zhu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhu, Jocelyn
Shen, Beiyi
Abbasi, Almas
Hoshmand-Kochi, Mahsa
Li, Haifang
Duong, Tim Q.
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title_full Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title_fullStr Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title_full_unstemmed Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title_short Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs
title_sort deep transfer learning artificial intelligence accurately stages covid-19 lung disease severity on portable chest radiographs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386587/
https://www.ncbi.nlm.nih.gov/pubmed/32722697
http://dx.doi.org/10.1371/journal.pone.0236621
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