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Data-driven contact structures: From homogeneous mixing to multilayer networks

The modeling of the spreading of communicable diseases has experienced significant advances in the last two decades or so. This has been possible due to the proliferation of data and the development of new methods to gather, mine and analyze it. A key role has also been played by the latest advances...

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Autores principales: Aleta, Alberto, Ferraz de Arruda, Guilherme, Moreno, Yamir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386617/
https://www.ncbi.nlm.nih.gov/pubmed/32673307
http://dx.doi.org/10.1371/journal.pcbi.1008035
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author Aleta, Alberto
Ferraz de Arruda, Guilherme
Moreno, Yamir
author_facet Aleta, Alberto
Ferraz de Arruda, Guilherme
Moreno, Yamir
author_sort Aleta, Alberto
collection PubMed
description The modeling of the spreading of communicable diseases has experienced significant advances in the last two decades or so. This has been possible due to the proliferation of data and the development of new methods to gather, mine and analyze it. A key role has also been played by the latest advances in new disciplines like network science. Nonetheless, current models still lack a faithful representation of all possible heterogeneities and features that can be extracted from data. Here, we bridge a current gap in the mathematical modeling of infectious diseases and develop a framework that allows to account simultaneously for both the connectivity of individuals and the age-structure of the population. We compare different scenarios, namely, i) the homogeneous mixing setting, ii) one in which only the social mixing is taken into account, iii) a setting that considers the connectivity of individuals alone, and finally, iv) a multilayer representation in which both the social mixing and the number of contacts are included in the model. We analytically show that the thresholds obtained for these four scenarios are different. In addition, we conduct extensive numerical simulations and conclude that heterogeneities in the contact network are important for a proper determination of the epidemic threshold, whereas the age-structure plays a bigger role beyond the onset of the outbreak. Altogether, when it comes to evaluate interventions such as vaccination, both sources of individual heterogeneity are important and should be concurrently considered. Our results also provide an indication of the errors incurred in situations in which one cannot access all needed information in terms of connectivity and age of the population.
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spelling pubmed-73866172020-08-05 Data-driven contact structures: From homogeneous mixing to multilayer networks Aleta, Alberto Ferraz de Arruda, Guilherme Moreno, Yamir PLoS Comput Biol Research Article The modeling of the spreading of communicable diseases has experienced significant advances in the last two decades or so. This has been possible due to the proliferation of data and the development of new methods to gather, mine and analyze it. A key role has also been played by the latest advances in new disciplines like network science. Nonetheless, current models still lack a faithful representation of all possible heterogeneities and features that can be extracted from data. Here, we bridge a current gap in the mathematical modeling of infectious diseases and develop a framework that allows to account simultaneously for both the connectivity of individuals and the age-structure of the population. We compare different scenarios, namely, i) the homogeneous mixing setting, ii) one in which only the social mixing is taken into account, iii) a setting that considers the connectivity of individuals alone, and finally, iv) a multilayer representation in which both the social mixing and the number of contacts are included in the model. We analytically show that the thresholds obtained for these four scenarios are different. In addition, we conduct extensive numerical simulations and conclude that heterogeneities in the contact network are important for a proper determination of the epidemic threshold, whereas the age-structure plays a bigger role beyond the onset of the outbreak. Altogether, when it comes to evaluate interventions such as vaccination, both sources of individual heterogeneity are important and should be concurrently considered. Our results also provide an indication of the errors incurred in situations in which one cannot access all needed information in terms of connectivity and age of the population. Public Library of Science 2020-07-16 /pmc/articles/PMC7386617/ /pubmed/32673307 http://dx.doi.org/10.1371/journal.pcbi.1008035 Text en © 2020 Aleta et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Aleta, Alberto
Ferraz de Arruda, Guilherme
Moreno, Yamir
Data-driven contact structures: From homogeneous mixing to multilayer networks
title Data-driven contact structures: From homogeneous mixing to multilayer networks
title_full Data-driven contact structures: From homogeneous mixing to multilayer networks
title_fullStr Data-driven contact structures: From homogeneous mixing to multilayer networks
title_full_unstemmed Data-driven contact structures: From homogeneous mixing to multilayer networks
title_short Data-driven contact structures: From homogeneous mixing to multilayer networks
title_sort data-driven contact structures: from homogeneous mixing to multilayer networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386617/
https://www.ncbi.nlm.nih.gov/pubmed/32673307
http://dx.doi.org/10.1371/journal.pcbi.1008035
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