Cargando…

Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models

Infectious disease outbreaks pose a significant threat to human health worldwide. The outbreak of pandemic coronavirus disease 2019 (COVID-19) has caused a global health emergency. Thus, identification of regions with high risk for COVID-19 outbreak and analyzing the behaviour of the infection is a...

Descripción completa

Detalles Bibliográficos
Autores principales: Pourghasemi, Hamid Reza, Pouyan, Soheila, Farajzadeh, Zakariya, Sadhasivam, Nitheshnirmal, Heidari, Bahram, Babaei, Sedigheh, Tiefenbacher, John P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386644/
https://www.ncbi.nlm.nih.gov/pubmed/32722716
http://dx.doi.org/10.1371/journal.pone.0236238
_version_ 1783563987446661120
author Pourghasemi, Hamid Reza
Pouyan, Soheila
Farajzadeh, Zakariya
Sadhasivam, Nitheshnirmal
Heidari, Bahram
Babaei, Sedigheh
Tiefenbacher, John P.
author_facet Pourghasemi, Hamid Reza
Pouyan, Soheila
Farajzadeh, Zakariya
Sadhasivam, Nitheshnirmal
Heidari, Bahram
Babaei, Sedigheh
Tiefenbacher, John P.
author_sort Pourghasemi, Hamid Reza
collection PubMed
description Infectious disease outbreaks pose a significant threat to human health worldwide. The outbreak of pandemic coronavirus disease 2019 (COVID-19) has caused a global health emergency. Thus, identification of regions with high risk for COVID-19 outbreak and analyzing the behaviour of the infection is a major priority of the governmental organizations and epidemiologists worldwide. The aims of the present study were to analyze the risk factors of coronavirus outbreak for identifying the areas having high risk of infection and to evaluate the behaviour of infection in Fars Province, Iran. A geographic information system (GIS)-based machine learning algorithm (MLA), support vector machine (SVM), was used for the assessment of the outbreak risk of COVID-19 in Fars Province, Iran whereas the daily observations of infected cases were tested in the—polynomial and the autoregressive integrated moving average (ARIMA) models to examine the patterns of virus infestation in the province and in Iran. The results of the disease outbreak in Iran were compared with the data for Iran and the world. Sixteen effective factors were selected for spatial modelling of outbreak risk. The validation outcome reveals that SVM achieved an AUC value of 0.786 (March 20), 0.799 (March 29), and 86.6 (April 10) that displays a good prediction of outbreak risk change detection. The results of the third-degree polynomial and ARIMA models in the province revealed an increasing trend with an evidence of turning, demonstrating extensive quarantines has been effective. The general trends of virus infestation in Iran and Fars Province were similar, although a more volatile growth of the infected cases is expected in the province. The results of this study might assist better programming COVID-19 disease prevention and control and gaining sorts of predictive capability would have wide-ranging benefits.
format Online
Article
Text
id pubmed-7386644
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-73866442020-08-05 Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models Pourghasemi, Hamid Reza Pouyan, Soheila Farajzadeh, Zakariya Sadhasivam, Nitheshnirmal Heidari, Bahram Babaei, Sedigheh Tiefenbacher, John P. PLoS One Research Article Infectious disease outbreaks pose a significant threat to human health worldwide. The outbreak of pandemic coronavirus disease 2019 (COVID-19) has caused a global health emergency. Thus, identification of regions with high risk for COVID-19 outbreak and analyzing the behaviour of the infection is a major priority of the governmental organizations and epidemiologists worldwide. The aims of the present study were to analyze the risk factors of coronavirus outbreak for identifying the areas having high risk of infection and to evaluate the behaviour of infection in Fars Province, Iran. A geographic information system (GIS)-based machine learning algorithm (MLA), support vector machine (SVM), was used for the assessment of the outbreak risk of COVID-19 in Fars Province, Iran whereas the daily observations of infected cases were tested in the—polynomial and the autoregressive integrated moving average (ARIMA) models to examine the patterns of virus infestation in the province and in Iran. The results of the disease outbreak in Iran were compared with the data for Iran and the world. Sixteen effective factors were selected for spatial modelling of outbreak risk. The validation outcome reveals that SVM achieved an AUC value of 0.786 (March 20), 0.799 (March 29), and 86.6 (April 10) that displays a good prediction of outbreak risk change detection. The results of the third-degree polynomial and ARIMA models in the province revealed an increasing trend with an evidence of turning, demonstrating extensive quarantines has been effective. The general trends of virus infestation in Iran and Fars Province were similar, although a more volatile growth of the infected cases is expected in the province. The results of this study might assist better programming COVID-19 disease prevention and control and gaining sorts of predictive capability would have wide-ranging benefits. Public Library of Science 2020-07-28 /pmc/articles/PMC7386644/ /pubmed/32722716 http://dx.doi.org/10.1371/journal.pone.0236238 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Pourghasemi, Hamid Reza
Pouyan, Soheila
Farajzadeh, Zakariya
Sadhasivam, Nitheshnirmal
Heidari, Bahram
Babaei, Sedigheh
Tiefenbacher, John P.
Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title_full Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title_fullStr Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title_full_unstemmed Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title_short Assessment of the outbreak risk, mapping and infection behavior of COVID-19: Application of the autoregressive integrated-moving average (ARIMA) and polynomial models
title_sort assessment of the outbreak risk, mapping and infection behavior of covid-19: application of the autoregressive integrated-moving average (arima) and polynomial models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386644/
https://www.ncbi.nlm.nih.gov/pubmed/32722716
http://dx.doi.org/10.1371/journal.pone.0236238
work_keys_str_mv AT pourghasemihamidreza assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT pouyansoheila assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT farajzadehzakariya assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT sadhasivamnitheshnirmal assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT heidaribahram assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT babaeisedigheh assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels
AT tiefenbacherjohnp assessmentoftheoutbreakriskmappingandinfectionbehaviorofcovid19applicationoftheautoregressiveintegratedmovingaveragearimaandpolynomialmodels