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Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the famil...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386786/ https://www.ncbi.nlm.nih.gov/pubmed/31904321 http://dx.doi.org/10.1099/ijsem.0.003947 |
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author | Pitt, Alexandra Koll, Ulrike Schmidt, Johanna Hahn, Martin W. |
author_facet | Pitt, Alexandra Koll, Ulrike Schmidt, Johanna Hahn, Martin W. |
author_sort | Pitt, Alexandra |
collection | PubMed |
description | Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the family Silvanigrellaceae , and strains 33A1-SZDP(T) and SP-Ram-0.45-NSY-1(T) of 94.1 and 99.1 %, respectively, suggested affiliation of the two strains with this family. Phylogenetic reconstructions with 16S rRNA gene sequences and phylogenomic analyses with amino acid sequences obtained from 103 single-copy genes suggested that the strains represent a new genus and a new species in the case of strain 33A1-SZDP(T) (=JCM 32978(T)=DSM 107810(T)), and a new species within the genus Silvanigrella in the case of strain SP-Ram-0.45-NSY-1(T) (=JCM 32975(T)=DSM 107809(T)). Cells of strain 33A1-SZDP(T) were motile, pleomorphic, purple-pigmented on agar plates, putatively due to violacein, and showed variable pigmentation in liquid media. They grew chemoorganotrophically and aerobically and tolerated salt concentrations up to 1.2 % NaCl (v/w). The genome size of strain 33A1-SZDP(T) was 3.4 Mbp and the G+C content was 32.2 mol%. For this new genus and new species, we propose the name Fluviispira multicolorata gen. nov., sp. nov. Cells of strain SP-Ram-0.45-NSY-1(T) were motile, pleomorphic, red-pigmented and grew chemoorganotrophically and aerobically. They tolerated salt concentrations up to 1.1 % NaCl (v/w). The genome size of strain SP-Ram-0.45-NSY-1(T) was 3.9 Mbp and the G+C content 29.3 mol%. For the new species within the genus Silvanigrella we propose the name Silvanigrella paludirubra sp. nov. |
format | Online Article Text |
id | pubmed-7386786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-73867862020-07-30 Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats Pitt, Alexandra Koll, Ulrike Schmidt, Johanna Hahn, Martin W. Int J Syst Evol Microbiol Taxonomic Description Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the family Silvanigrellaceae , and strains 33A1-SZDP(T) and SP-Ram-0.45-NSY-1(T) of 94.1 and 99.1 %, respectively, suggested affiliation of the two strains with this family. Phylogenetic reconstructions with 16S rRNA gene sequences and phylogenomic analyses with amino acid sequences obtained from 103 single-copy genes suggested that the strains represent a new genus and a new species in the case of strain 33A1-SZDP(T) (=JCM 32978(T)=DSM 107810(T)), and a new species within the genus Silvanigrella in the case of strain SP-Ram-0.45-NSY-1(T) (=JCM 32975(T)=DSM 107809(T)). Cells of strain 33A1-SZDP(T) were motile, pleomorphic, purple-pigmented on agar plates, putatively due to violacein, and showed variable pigmentation in liquid media. They grew chemoorganotrophically and aerobically and tolerated salt concentrations up to 1.2 % NaCl (v/w). The genome size of strain 33A1-SZDP(T) was 3.4 Mbp and the G+C content was 32.2 mol%. For this new genus and new species, we propose the name Fluviispira multicolorata gen. nov., sp. nov. Cells of strain SP-Ram-0.45-NSY-1(T) were motile, pleomorphic, red-pigmented and grew chemoorganotrophically and aerobically. They tolerated salt concentrations up to 1.1 % NaCl (v/w). The genome size of strain SP-Ram-0.45-NSY-1(T) was 3.9 Mbp and the G+C content 29.3 mol%. For the new species within the genus Silvanigrella we propose the name Silvanigrella paludirubra sp. nov. Microbiology Society 2020-03 2020-01-06 /pmc/articles/PMC7386786/ /pubmed/31904321 http://dx.doi.org/10.1099/ijsem.0.003947 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License. |
spellingShingle | Taxonomic Description Pitt, Alexandra Koll, Ulrike Schmidt, Johanna Hahn, Martin W. Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title |
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title_full |
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title_fullStr |
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title_full_unstemmed |
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title_short |
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
title_sort | fluviispira multicolorata gen. nov., sp. nov. and silvanigrella paludirubra sp. nov., isolated from freshwater habitats |
topic | Taxonomic Description |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386786/ https://www.ncbi.nlm.nih.gov/pubmed/31904321 http://dx.doi.org/10.1099/ijsem.0.003947 |
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