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Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats

Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the famil...

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Autores principales: Pitt, Alexandra, Koll, Ulrike, Schmidt, Johanna, Hahn, Martin W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386786/
https://www.ncbi.nlm.nih.gov/pubmed/31904321
http://dx.doi.org/10.1099/ijsem.0.003947
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author Pitt, Alexandra
Koll, Ulrike
Schmidt, Johanna
Hahn, Martin W.
author_facet Pitt, Alexandra
Koll, Ulrike
Schmidt, Johanna
Hahn, Martin W.
author_sort Pitt, Alexandra
collection PubMed
description Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the family Silvanigrellaceae , and strains 33A1-SZDP(T) and SP-Ram-0.45-NSY-1(T) of 94.1 and 99.1 %, respectively, suggested affiliation of the two strains with this family. Phylogenetic reconstructions with 16S rRNA gene sequences and phylogenomic analyses with amino acid sequences obtained from 103 single-copy genes suggested that the strains represent a new genus and a new species in the case of strain 33A1-SZDP(T) (=JCM 32978(T)=DSM 107810(T)), and a new species within the genus Silvanigrella in the case of strain SP-Ram-0.45-NSY-1(T) (=JCM 32975(T)=DSM 107809(T)). Cells of strain 33A1-SZDP(T) were motile, pleomorphic, purple-pigmented on agar plates, putatively due to violacein, and showed variable pigmentation in liquid media. They grew chemoorganotrophically and aerobically and tolerated salt concentrations up to 1.2 % NaCl (v/w). The genome size of strain 33A1-SZDP(T) was 3.4 Mbp and the G+C content was 32.2 mol%. For this new genus and new species, we propose the name Fluviispira multicolorata gen. nov., sp. nov. Cells of strain SP-Ram-0.45-NSY-1(T) were motile, pleomorphic, red-pigmented and grew chemoorganotrophically and aerobically. They tolerated salt concentrations up to 1.1 % NaCl (v/w). The genome size of strain SP-Ram-0.45-NSY-1(T) was 3.9 Mbp and the G+C content 29.3 mol%. For the new species within the genus Silvanigrella we propose the name Silvanigrella paludirubra sp. nov.
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spelling pubmed-73867862020-07-30 Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats Pitt, Alexandra Koll, Ulrike Schmidt, Johanna Hahn, Martin W. Int J Syst Evol Microbiol Taxonomic Description Strain 33A1-SZDP(T) was isolated from a small creek located in Puch, Austria. Strain SP-Ram-0.45-NSY-1(T) was obtained from a small pond located in Schönramer Moor, Germany. 16S rRNA gene sequence similarities between the type strain of Silvanigrella aquatica , currently the only member of the family Silvanigrellaceae , and strains 33A1-SZDP(T) and SP-Ram-0.45-NSY-1(T) of 94.1 and 99.1 %, respectively, suggested affiliation of the two strains with this family. Phylogenetic reconstructions with 16S rRNA gene sequences and phylogenomic analyses with amino acid sequences obtained from 103 single-copy genes suggested that the strains represent a new genus and a new species in the case of strain 33A1-SZDP(T) (=JCM 32978(T)=DSM 107810(T)), and a new species within the genus Silvanigrella in the case of strain SP-Ram-0.45-NSY-1(T) (=JCM 32975(T)=DSM 107809(T)). Cells of strain 33A1-SZDP(T) were motile, pleomorphic, purple-pigmented on agar plates, putatively due to violacein, and showed variable pigmentation in liquid media. They grew chemoorganotrophically and aerobically and tolerated salt concentrations up to 1.2 % NaCl (v/w). The genome size of strain 33A1-SZDP(T) was 3.4 Mbp and the G+C content was 32.2 mol%. For this new genus and new species, we propose the name Fluviispira multicolorata gen. nov., sp. nov. Cells of strain SP-Ram-0.45-NSY-1(T) were motile, pleomorphic, red-pigmented and grew chemoorganotrophically and aerobically. They tolerated salt concentrations up to 1.1 % NaCl (v/w). The genome size of strain SP-Ram-0.45-NSY-1(T) was 3.9 Mbp and the G+C content 29.3 mol%. For the new species within the genus Silvanigrella we propose the name Silvanigrella paludirubra sp. nov. Microbiology Society 2020-03 2020-01-06 /pmc/articles/PMC7386786/ /pubmed/31904321 http://dx.doi.org/10.1099/ijsem.0.003947 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License.
spellingShingle Taxonomic Description
Pitt, Alexandra
Koll, Ulrike
Schmidt, Johanna
Hahn, Martin W.
Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title_full Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title_fullStr Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title_full_unstemmed Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title_short Fluviispira multicolorata gen. nov., sp. nov. and Silvanigrella paludirubra sp. nov., isolated from freshwater habitats
title_sort fluviispira multicolorata gen. nov., sp. nov. and silvanigrella paludirubra sp. nov., isolated from freshwater habitats
topic Taxonomic Description
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7386786/
https://www.ncbi.nlm.nih.gov/pubmed/31904321
http://dx.doi.org/10.1099/ijsem.0.003947
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