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Multi-group analysis using generalized additive kernel canonical correlation analysis

Multivariate analysis has been widely used and one of the popular multivariate analysis methods is canonical correlation analysis (CCA). CCA finds the linear combination in each group that maximizes the Pearson correlation. CCA has been extended to a kernel CCA for nonlinear relationships and genera...

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Autores principales: Bae, Eunseong, Hur, Ji-Won, Kim, Jinyoung, Kwon, Jun Soo, Lee, Jongho, Lee, Sang-Hun, Lim, Chae Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7387565/
https://www.ncbi.nlm.nih.gov/pubmed/32724222
http://dx.doi.org/10.1038/s41598-020-69575-x
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author Bae, Eunseong
Hur, Ji-Won
Kim, Jinyoung
Kwon, Jun Soo
Lee, Jongho
Lee, Sang-Hun
Lim, Chae Young
author_facet Bae, Eunseong
Hur, Ji-Won
Kim, Jinyoung
Kwon, Jun Soo
Lee, Jongho
Lee, Sang-Hun
Lim, Chae Young
author_sort Bae, Eunseong
collection PubMed
description Multivariate analysis has been widely used and one of the popular multivariate analysis methods is canonical correlation analysis (CCA). CCA finds the linear combination in each group that maximizes the Pearson correlation. CCA has been extended to a kernel CCA for nonlinear relationships and generalized CCA that can consider more than two groups. We propose an extension of CCA that allows multi-group and nonlinear relationships in an additive fashion for a better interpretation, which we termed as Generalized Additive Kernel Canonical Correlation Analysis (GAKCCA). In addition to exploring multi-group relationship with nonlinear extension, GAKCCA can reveal contribution of variables in each group; which enables in-depth structural analysis. A simulation study shows that GAKCCA can distinguish a relationship between groups and whether they are correlated or not. We applied GAKCCA to real data on neurodevelopmental status, psychosocial factors, clinical problems as well as neurophysiological measures of individuals. As a result, it is shown that the neurophysiological domain has a statistically significant relationship with the neurodevelopmental domain and clinical domain, respectively, which was not revealed in the ordinary CCA.
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spelling pubmed-73875652020-07-29 Multi-group analysis using generalized additive kernel canonical correlation analysis Bae, Eunseong Hur, Ji-Won Kim, Jinyoung Kwon, Jun Soo Lee, Jongho Lee, Sang-Hun Lim, Chae Young Sci Rep Article Multivariate analysis has been widely used and one of the popular multivariate analysis methods is canonical correlation analysis (CCA). CCA finds the linear combination in each group that maximizes the Pearson correlation. CCA has been extended to a kernel CCA for nonlinear relationships and generalized CCA that can consider more than two groups. We propose an extension of CCA that allows multi-group and nonlinear relationships in an additive fashion for a better interpretation, which we termed as Generalized Additive Kernel Canonical Correlation Analysis (GAKCCA). In addition to exploring multi-group relationship with nonlinear extension, GAKCCA can reveal contribution of variables in each group; which enables in-depth structural analysis. A simulation study shows that GAKCCA can distinguish a relationship between groups and whether they are correlated or not. We applied GAKCCA to real data on neurodevelopmental status, psychosocial factors, clinical problems as well as neurophysiological measures of individuals. As a result, it is shown that the neurophysiological domain has a statistically significant relationship with the neurodevelopmental domain and clinical domain, respectively, which was not revealed in the ordinary CCA. Nature Publishing Group UK 2020-07-28 /pmc/articles/PMC7387565/ /pubmed/32724222 http://dx.doi.org/10.1038/s41598-020-69575-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Bae, Eunseong
Hur, Ji-Won
Kim, Jinyoung
Kwon, Jun Soo
Lee, Jongho
Lee, Sang-Hun
Lim, Chae Young
Multi-group analysis using generalized additive kernel canonical correlation analysis
title Multi-group analysis using generalized additive kernel canonical correlation analysis
title_full Multi-group analysis using generalized additive kernel canonical correlation analysis
title_fullStr Multi-group analysis using generalized additive kernel canonical correlation analysis
title_full_unstemmed Multi-group analysis using generalized additive kernel canonical correlation analysis
title_short Multi-group analysis using generalized additive kernel canonical correlation analysis
title_sort multi-group analysis using generalized additive kernel canonical correlation analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7387565/
https://www.ncbi.nlm.nih.gov/pubmed/32724222
http://dx.doi.org/10.1038/s41598-020-69575-x
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