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Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory

Laboratory studies are often criticized for not being representative of processes occurring in natural populations. One reason for this is the fact that laboratory populations generally do not capture enough of the genetic variation of natural populations. This can be mitigated by mixing the genetic...

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Autores principales: Godinho, Diogo P., Cruz, Miguel A., Charlery de la Masselière, Maud, Teodoro‐Paulo, Jéssica, Eira, Cátia, Fragata, Inês, Rodrigues, Leonor R., Zélé, Flore, Magalhães, Sara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7391545/
https://www.ncbi.nlm.nih.gov/pubmed/32760529
http://dx.doi.org/10.1002/ece3.6454
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author Godinho, Diogo P.
Cruz, Miguel A.
Charlery de la Masselière, Maud
Teodoro‐Paulo, Jéssica
Eira, Cátia
Fragata, Inês
Rodrigues, Leonor R.
Zélé, Flore
Magalhães, Sara
author_facet Godinho, Diogo P.
Cruz, Miguel A.
Charlery de la Masselière, Maud
Teodoro‐Paulo, Jéssica
Eira, Cátia
Fragata, Inês
Rodrigues, Leonor R.
Zélé, Flore
Magalhães, Sara
author_sort Godinho, Diogo P.
collection PubMed
description Laboratory studies are often criticized for not being representative of processes occurring in natural populations. One reason for this is the fact that laboratory populations generally do not capture enough of the genetic variation of natural populations. This can be mitigated by mixing the genetic background of several field populations when creating laboratory populations. From these outbred populations, it is possible to generate inbred lines, thereby freezing and partitioning part of their variability, allowing each genotype to be characterized independently. Many studies addressing adaptation of organisms to their environment, such as those involving quantitative genetics or experimental evolution, rely on inbred or outbred populations, but the methodology underlying the generation of such biological resources is usually not explicitly documented. Here, we developed different procedures to circumvent common pitfalls of laboratory studies, and illustrate their application using two haplodiploid species, the spider mites Tetranychus urticae and Tetranychus evansi. First, we present a method that increases the chance of capturing high amounts of variability when creating outbred populations, by performing controlled crosses between individuals from different field‐collected populations. Second, we depict the creation of inbred lines derived from such outbred populations, by performing several generations of sib‐mating. Third, we outline an experimental evolution protocol that allows the maintenance of a constant population size at the beginning of each generation, thereby preventing bottlenecks and diminishing extinction risks. Finally, we discuss the advantages of these procedures and emphasize that sharing such biological resources and combining them with available genetic tools will allow consistent and comparable studies that greatly contribute to our understanding of ecological and evolutionary processes.
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spelling pubmed-73915452020-08-04 Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory Godinho, Diogo P. Cruz, Miguel A. Charlery de la Masselière, Maud Teodoro‐Paulo, Jéssica Eira, Cátia Fragata, Inês Rodrigues, Leonor R. Zélé, Flore Magalhães, Sara Ecol Evol Original Research Laboratory studies are often criticized for not being representative of processes occurring in natural populations. One reason for this is the fact that laboratory populations generally do not capture enough of the genetic variation of natural populations. This can be mitigated by mixing the genetic background of several field populations when creating laboratory populations. From these outbred populations, it is possible to generate inbred lines, thereby freezing and partitioning part of their variability, allowing each genotype to be characterized independently. Many studies addressing adaptation of organisms to their environment, such as those involving quantitative genetics or experimental evolution, rely on inbred or outbred populations, but the methodology underlying the generation of such biological resources is usually not explicitly documented. Here, we developed different procedures to circumvent common pitfalls of laboratory studies, and illustrate their application using two haplodiploid species, the spider mites Tetranychus urticae and Tetranychus evansi. First, we present a method that increases the chance of capturing high amounts of variability when creating outbred populations, by performing controlled crosses between individuals from different field‐collected populations. Second, we depict the creation of inbred lines derived from such outbred populations, by performing several generations of sib‐mating. Third, we outline an experimental evolution protocol that allows the maintenance of a constant population size at the beginning of each generation, thereby preventing bottlenecks and diminishing extinction risks. Finally, we discuss the advantages of these procedures and emphasize that sharing such biological resources and combining them with available genetic tools will allow consistent and comparable studies that greatly contribute to our understanding of ecological and evolutionary processes. John Wiley and Sons Inc. 2020-07-07 /pmc/articles/PMC7391545/ /pubmed/32760529 http://dx.doi.org/10.1002/ece3.6454 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Godinho, Diogo P.
Cruz, Miguel A.
Charlery de la Masselière, Maud
Teodoro‐Paulo, Jéssica
Eira, Cátia
Fragata, Inês
Rodrigues, Leonor R.
Zélé, Flore
Magalhães, Sara
Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title_full Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title_fullStr Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title_full_unstemmed Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title_short Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
title_sort creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7391545/
https://www.ncbi.nlm.nih.gov/pubmed/32760529
http://dx.doi.org/10.1002/ece3.6454
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