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Polypeptide formation in clusters of β-alanine amino acids by single ion impact
The formation of peptide bonds by energetic processing of amino acids is an important step towards the formation of biologically relevant molecules. As amino acids are present in space, scenarios have been developed to identify the roots of life on Earth, either by processes occurring in outer space...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7393107/ https://www.ncbi.nlm.nih.gov/pubmed/32732937 http://dx.doi.org/10.1038/s41467-020-17653-z |
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author | Rousseau, Patrick Piekarski, Dariusz G. Capron, Michael Domaracka, Alicja Adoui, Lamri Martín, Fernando Alcamí, Manuel Díaz-Tendero, Sergio Huber, Bernd A. |
author_facet | Rousseau, Patrick Piekarski, Dariusz G. Capron, Michael Domaracka, Alicja Adoui, Lamri Martín, Fernando Alcamí, Manuel Díaz-Tendero, Sergio Huber, Bernd A. |
author_sort | Rousseau, Patrick |
collection | PubMed |
description | The formation of peptide bonds by energetic processing of amino acids is an important step towards the formation of biologically relevant molecules. As amino acids are present in space, scenarios have been developed to identify the roots of life on Earth, either by processes occurring in outer space or on Earth itself. We study the formation of peptide bonds in single collisions of low-energy He(2+) ions (α-particles) with loosely bound clusters of β-alanine molecules at impact energies typical for solar wind. Experimental fragmentation mass spectra produced by collisions are compared with results of molecular dynamics simulations and an exhaustive exploration of potential energy surfaces. We show that peptide bonds are efficiently formed by water molecule emission, leading to the formation of up to tetrapeptide. The present results show that a plausible route to polypeptides formation in space is the collision of energetic ions with small clusters of amino acids. |
format | Online Article Text |
id | pubmed-7393107 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-73931072020-08-12 Polypeptide formation in clusters of β-alanine amino acids by single ion impact Rousseau, Patrick Piekarski, Dariusz G. Capron, Michael Domaracka, Alicja Adoui, Lamri Martín, Fernando Alcamí, Manuel Díaz-Tendero, Sergio Huber, Bernd A. Nat Commun Article The formation of peptide bonds by energetic processing of amino acids is an important step towards the formation of biologically relevant molecules. As amino acids are present in space, scenarios have been developed to identify the roots of life on Earth, either by processes occurring in outer space or on Earth itself. We study the formation of peptide bonds in single collisions of low-energy He(2+) ions (α-particles) with loosely bound clusters of β-alanine molecules at impact energies typical for solar wind. Experimental fragmentation mass spectra produced by collisions are compared with results of molecular dynamics simulations and an exhaustive exploration of potential energy surfaces. We show that peptide bonds are efficiently formed by water molecule emission, leading to the formation of up to tetrapeptide. The present results show that a plausible route to polypeptides formation in space is the collision of energetic ions with small clusters of amino acids. Nature Publishing Group UK 2020-07-30 /pmc/articles/PMC7393107/ /pubmed/32732937 http://dx.doi.org/10.1038/s41467-020-17653-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Rousseau, Patrick Piekarski, Dariusz G. Capron, Michael Domaracka, Alicja Adoui, Lamri Martín, Fernando Alcamí, Manuel Díaz-Tendero, Sergio Huber, Bernd A. Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title | Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title_full | Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title_fullStr | Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title_full_unstemmed | Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title_short | Polypeptide formation in clusters of β-alanine amino acids by single ion impact |
title_sort | polypeptide formation in clusters of β-alanine amino acids by single ion impact |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7393107/ https://www.ncbi.nlm.nih.gov/pubmed/32732937 http://dx.doi.org/10.1038/s41467-020-17653-z |
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