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A data-driven model to describe and forecast the dynamics of COVID-19 transmission

This paper proposes a dynamic model to describe and forecast the dynamics of the coronavirus disease COVID-19 transmission. The model is based on an approach previously used to describe the Middle East Respiratory Syndrome (MERS) epidemic. This methodology is used to describe the COVID-19 dynamics i...

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Autores principales: Paiva, Henrique Mohallem, Afonso, Rubens Junqueira Magalhães, de Oliveira, Igor Luppi, Garcia, Gabriele Fernandes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7394373/
https://www.ncbi.nlm.nih.gov/pubmed/32735581
http://dx.doi.org/10.1371/journal.pone.0236386
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author Paiva, Henrique Mohallem
Afonso, Rubens Junqueira Magalhães
de Oliveira, Igor Luppi
Garcia, Gabriele Fernandes
author_facet Paiva, Henrique Mohallem
Afonso, Rubens Junqueira Magalhães
de Oliveira, Igor Luppi
Garcia, Gabriele Fernandes
author_sort Paiva, Henrique Mohallem
collection PubMed
description This paper proposes a dynamic model to describe and forecast the dynamics of the coronavirus disease COVID-19 transmission. The model is based on an approach previously used to describe the Middle East Respiratory Syndrome (MERS) epidemic. This methodology is used to describe the COVID-19 dynamics in six countries where the pandemic is widely spread, namely China, Italy, Spain, France, Germany, and the USA. For this purpose, data from the European Centre for Disease Prevention and Control (ECDC) are adopted. It is shown how the model can be used to forecast new infection cases and new deceased and how the uncertainties associated to this prediction can be quantified. This approach has the advantage of being relatively simple, grouping in few mathematical parameters the many conditions which affect the spreading of the disease. On the other hand, it requires previous data from the disease transmission in the country, being better suited for regions where the epidemic is not at a very early stage. With the estimated parameters at hand, one can use the model to predict the evolution of the disease, which in turn enables authorities to plan their actions. Moreover, one key advantage is the straightforward interpretation of these parameters and their influence over the evolution of the disease, which enables altering some of them, so that one can evaluate the effect of public policy, such as social distancing. The results presented for the selected countries confirm the accuracy to perform predictions.
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spelling pubmed-73943732020-08-07 A data-driven model to describe and forecast the dynamics of COVID-19 transmission Paiva, Henrique Mohallem Afonso, Rubens Junqueira Magalhães de Oliveira, Igor Luppi Garcia, Gabriele Fernandes PLoS One Research Article This paper proposes a dynamic model to describe and forecast the dynamics of the coronavirus disease COVID-19 transmission. The model is based on an approach previously used to describe the Middle East Respiratory Syndrome (MERS) epidemic. This methodology is used to describe the COVID-19 dynamics in six countries where the pandemic is widely spread, namely China, Italy, Spain, France, Germany, and the USA. For this purpose, data from the European Centre for Disease Prevention and Control (ECDC) are adopted. It is shown how the model can be used to forecast new infection cases and new deceased and how the uncertainties associated to this prediction can be quantified. This approach has the advantage of being relatively simple, grouping in few mathematical parameters the many conditions which affect the spreading of the disease. On the other hand, it requires previous data from the disease transmission in the country, being better suited for regions where the epidemic is not at a very early stage. With the estimated parameters at hand, one can use the model to predict the evolution of the disease, which in turn enables authorities to plan their actions. Moreover, one key advantage is the straightforward interpretation of these parameters and their influence over the evolution of the disease, which enables altering some of them, so that one can evaluate the effect of public policy, such as social distancing. The results presented for the selected countries confirm the accuracy to perform predictions. Public Library of Science 2020-07-31 /pmc/articles/PMC7394373/ /pubmed/32735581 http://dx.doi.org/10.1371/journal.pone.0236386 Text en © 2020 Paiva et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Paiva, Henrique Mohallem
Afonso, Rubens Junqueira Magalhães
de Oliveira, Igor Luppi
Garcia, Gabriele Fernandes
A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title_full A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title_fullStr A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title_full_unstemmed A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title_short A data-driven model to describe and forecast the dynamics of COVID-19 transmission
title_sort data-driven model to describe and forecast the dynamics of covid-19 transmission
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7394373/
https://www.ncbi.nlm.nih.gov/pubmed/32735581
http://dx.doi.org/10.1371/journal.pone.0236386
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