Cargando…
Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns
BACKGROUND: Genus Vicia is a member of family Fabaceae and comprises 180 to 210 species. The most important species is faba bean (Vicia faba) which is still one of the most favourable grain legumes over all the world. The genus contains some additional food crops and a number of forage plants and so...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7394970/ https://www.ncbi.nlm.nih.gov/pubmed/32737692 http://dx.doi.org/10.1186/s43141-020-00054-6 |
_version_ | 1783565312066584576 |
---|---|
author | Ali, Hoda B. M. Osman, Samira A. |
author_facet | Ali, Hoda B. M. Osman, Samira A. |
author_sort | Ali, Hoda B. M. |
collection | PubMed |
description | BACKGROUND: Genus Vicia is a member of family Fabaceae and comprises 180 to 210 species. The most important species is faba bean (Vicia faba) which is still one of the most favourable grain legumes over all the world. The genus contains some additional food crops and a number of forage plants and some other weedy strains such as Vicia angustifolia and Vicia cordata. The aim of the present investigation is to elucidate the phylogenetic relationships among four Vicia species, two species (Vicia angustifolia L. ssp. Angustifolia (2n = 12) and Vicia cordata wulfen ex Hoppe (2n = 10)) belong to section Vicia, Vicia dalmatica A. Kern (2n = 12, section Cracca), and Vicia johannis tamamsch (2n = 14, section Faba). RESULTS: Two tools have been applied to identify the genetic relationships among the examined species, double fluorescence in situ hybridization (FISH) has been used to localize the sites of 5S and 45S rDNA, and sodium dodecyl sulfate-poly acrylamide gel electrophoretic (SDS-PAGE) patterns of total seed storage protein fractions. Double FISH experiment has not shown any variation in the loci number, but the positions along the chromosomes were different; both Vicia johannis and Vicia dalmatica exhibited the same interstitial 45S rRNA gene loci, while Vicia angustifolia and Vicia cordata have shown single large stretched 45S rRNA loci almost at the terminal region of the shortest chromosome. It could be concluded from the similarity matrix among the Vicia species as computed according to Jaccard coefficient from the SDS-PAGE, that V. cordata is similar to V. angustifolia and V. dalmatica by a percentage of 73 and 69%, respectively, and the most related species to V. johannis is V. dalmatica (~ 64%). CONCLUSION: FISH and SDS-PAGE of the total seed storage proteins together reflected the similar genetic relationship among the studied species as fellows, V. angustifolia is more related to V. cordata then comes V. dalmatica and then V. johannis which is at a distal position from the other species. |
format | Online Article Text |
id | pubmed-7394970 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-73949702020-08-11 Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns Ali, Hoda B. M. Osman, Samira A. J Genet Eng Biotechnol Research BACKGROUND: Genus Vicia is a member of family Fabaceae and comprises 180 to 210 species. The most important species is faba bean (Vicia faba) which is still one of the most favourable grain legumes over all the world. The genus contains some additional food crops and a number of forage plants and some other weedy strains such as Vicia angustifolia and Vicia cordata. The aim of the present investigation is to elucidate the phylogenetic relationships among four Vicia species, two species (Vicia angustifolia L. ssp. Angustifolia (2n = 12) and Vicia cordata wulfen ex Hoppe (2n = 10)) belong to section Vicia, Vicia dalmatica A. Kern (2n = 12, section Cracca), and Vicia johannis tamamsch (2n = 14, section Faba). RESULTS: Two tools have been applied to identify the genetic relationships among the examined species, double fluorescence in situ hybridization (FISH) has been used to localize the sites of 5S and 45S rDNA, and sodium dodecyl sulfate-poly acrylamide gel electrophoretic (SDS-PAGE) patterns of total seed storage protein fractions. Double FISH experiment has not shown any variation in the loci number, but the positions along the chromosomes were different; both Vicia johannis and Vicia dalmatica exhibited the same interstitial 45S rRNA gene loci, while Vicia angustifolia and Vicia cordata have shown single large stretched 45S rRNA loci almost at the terminal region of the shortest chromosome. It could be concluded from the similarity matrix among the Vicia species as computed according to Jaccard coefficient from the SDS-PAGE, that V. cordata is similar to V. angustifolia and V. dalmatica by a percentage of 73 and 69%, respectively, and the most related species to V. johannis is V. dalmatica (~ 64%). CONCLUSION: FISH and SDS-PAGE of the total seed storage proteins together reflected the similar genetic relationship among the studied species as fellows, V. angustifolia is more related to V. cordata then comes V. dalmatica and then V. johannis which is at a distal position from the other species. Springer Berlin Heidelberg 2020-07-31 /pmc/articles/PMC7394970/ /pubmed/32737692 http://dx.doi.org/10.1186/s43141-020-00054-6 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Research Ali, Hoda B. M. Osman, Samira A. Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title | Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title_full | Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title_fullStr | Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title_full_unstemmed | Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title_short | Genetic relationship study of some Vicia species by FISH and total seed storage protein patterns |
title_sort | genetic relationship study of some vicia species by fish and total seed storage protein patterns |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7394970/ https://www.ncbi.nlm.nih.gov/pubmed/32737692 http://dx.doi.org/10.1186/s43141-020-00054-6 |
work_keys_str_mv | AT alihodabm geneticrelationshipstudyofsomeviciaspeciesbyfishandtotalseedstorageproteinpatterns AT osmansamiraa geneticrelationshipstudyofsomeviciaspeciesbyfishandtotalseedstorageproteinpatterns |