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Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China
BACKGROUND: Aleutian mink disease parvovirus (AMDV) causes Aleutian mink disease (AMD), which is a serious infectious disease of mink. The aim of this study was to get a better understanding of the molecular epidemiology of AMDV in northeast China to control and prevent AMD from further spreading. T...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395569/ https://www.ncbi.nlm.nih.gov/pubmed/32738897 http://dx.doi.org/10.1186/s12866-020-01910-8 |
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author | Tong, Mingwei Sun, Na Cao, Zhigang Cheng, Yuening Zhang, Miao Cheng, Shipeng Yi, Li |
author_facet | Tong, Mingwei Sun, Na Cao, Zhigang Cheng, Yuening Zhang, Miao Cheng, Shipeng Yi, Li |
author_sort | Tong, Mingwei |
collection | PubMed |
description | BACKGROUND: Aleutian mink disease parvovirus (AMDV) causes Aleutian mink disease (AMD), which is a serious infectious disease of mink. The aim of this study was to get a better understanding of the molecular epidemiology of AMDV in northeast China to control and prevent AMD from further spreading. This study for the first time isolated AMDV from fecal swab samples of mink in China. RESULTS: A total of 157/291 (54.0%) of the fecal swab samples were positive for AMDV. Of these, 23 AMDV positive samples were randomly selected for sequence alignment and phylogenetic analysis based on the acquired partial fragments of VP2 gene with the hypervariable region. Comparative DNA sequence analysis of 23 AMDV isolates with a reference nonpathogenic (AMDV-G) strain revealed 8.3% difference in partial VP2 nucleotide sequences. Amino acid alignment indicated the presence of several genetic variants, as well as one single amino acid residue deletion. The most concentrated area of variation was located in the hypervariable region of VP2 protein. According to phylogenetic analysis, the Chinese AMDV strains and the other reference AMDV strains from different countries clustered into three groups (clades A, B and C). Most of the newly sequenced strains were found to form a Chinese-specific group, which solely consisted of Chinese AMDV strains. CONCLUSION: These findings indicated that a high genetic diversity was found in Chinese AMDV strains and the virus distribution were not dependent on geographical origin. Both local and imported AMDV positive species were prevalent in the Chinese mink farming population. The genetic evidence of AMDV variety and epidemic isolates have importance in mink farming practice. |
format | Online Article Text |
id | pubmed-7395569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-73955692020-08-03 Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China Tong, Mingwei Sun, Na Cao, Zhigang Cheng, Yuening Zhang, Miao Cheng, Shipeng Yi, Li BMC Microbiol Research Article BACKGROUND: Aleutian mink disease parvovirus (AMDV) causes Aleutian mink disease (AMD), which is a serious infectious disease of mink. The aim of this study was to get a better understanding of the molecular epidemiology of AMDV in northeast China to control and prevent AMD from further spreading. This study for the first time isolated AMDV from fecal swab samples of mink in China. RESULTS: A total of 157/291 (54.0%) of the fecal swab samples were positive for AMDV. Of these, 23 AMDV positive samples were randomly selected for sequence alignment and phylogenetic analysis based on the acquired partial fragments of VP2 gene with the hypervariable region. Comparative DNA sequence analysis of 23 AMDV isolates with a reference nonpathogenic (AMDV-G) strain revealed 8.3% difference in partial VP2 nucleotide sequences. Amino acid alignment indicated the presence of several genetic variants, as well as one single amino acid residue deletion. The most concentrated area of variation was located in the hypervariable region of VP2 protein. According to phylogenetic analysis, the Chinese AMDV strains and the other reference AMDV strains from different countries clustered into three groups (clades A, B and C). Most of the newly sequenced strains were found to form a Chinese-specific group, which solely consisted of Chinese AMDV strains. CONCLUSION: These findings indicated that a high genetic diversity was found in Chinese AMDV strains and the virus distribution were not dependent on geographical origin. Both local and imported AMDV positive species were prevalent in the Chinese mink farming population. The genetic evidence of AMDV variety and epidemic isolates have importance in mink farming practice. BioMed Central 2020-08-01 /pmc/articles/PMC7395569/ /pubmed/32738897 http://dx.doi.org/10.1186/s12866-020-01910-8 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Tong, Mingwei Sun, Na Cao, Zhigang Cheng, Yuening Zhang, Miao Cheng, Shipeng Yi, Li Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title | Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title_full | Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title_fullStr | Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title_full_unstemmed | Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title_short | Molecular epidemiology of Aleutian mink disease virus from fecal swab of mink in northeast China |
title_sort | molecular epidemiology of aleutian mink disease virus from fecal swab of mink in northeast china |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395569/ https://www.ncbi.nlm.nih.gov/pubmed/32738897 http://dx.doi.org/10.1186/s12866-020-01910-8 |
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