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A novel curation system to facilitate data integration across regional citizen science survey programs
Integrative modeling methods can now enable macrosystem-level understandings of biodiversity patterns, such as range changes resulting from shifts in climate or land use, by aggregating species-level data across multiple monitoring sources. This requires ensuring that taxon interpretations match up...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395600/ https://www.ncbi.nlm.nih.gov/pubmed/32821528 http://dx.doi.org/10.7717/peerj.9219 |
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author | Campbell, Dana L. Thessen, Anne E. Ries, Leslie |
author_facet | Campbell, Dana L. Thessen, Anne E. Ries, Leslie |
author_sort | Campbell, Dana L. |
collection | PubMed |
description | Integrative modeling methods can now enable macrosystem-level understandings of biodiversity patterns, such as range changes resulting from shifts in climate or land use, by aggregating species-level data across multiple monitoring sources. This requires ensuring that taxon interpretations match up across different sources. While encouraging checklist standardization is certainly an option, coercing programs to change species lists they have used consistently for decades is rarely successful. Here we demonstrate a novel approach for tracking equivalent names and concepts, applied to a network of 10 regional programs that use the same protocols (so-called “Pollard walks”) to monitor butterflies across America north of Mexico. Our system involves, for each monitoring program, associating the taxonomic authority (in this case one of three North American butterfly fauna treatments: Pelham, 2014; North American Butterfly Association, Inc., 2016; Opler & Warren, 2003) that shares the most similar overall taxonomic interpretation to the program’s working species list. This allows us to define each term on each program’s list in the context of the appropriate authority’s species concept and curate the term alongside its authoritative concept. We then aligned the names representing equivalent taxonomic concepts among the three authorities. These stepping stones allow us to bridge a species concept from one program’s species list to the name of the equivalent in any other program, through the intermediary scaffolding of aligned authoritative taxon concepts. Using a software tool we developed to access our curation system, a user can link equivalent species concepts between data collecting agencies with no specialized knowledge of taxonomic complexities. |
format | Online Article Text |
id | pubmed-7395600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73956002020-08-18 A novel curation system to facilitate data integration across regional citizen science survey programs Campbell, Dana L. Thessen, Anne E. Ries, Leslie PeerJ Biodiversity Integrative modeling methods can now enable macrosystem-level understandings of biodiversity patterns, such as range changes resulting from shifts in climate or land use, by aggregating species-level data across multiple monitoring sources. This requires ensuring that taxon interpretations match up across different sources. While encouraging checklist standardization is certainly an option, coercing programs to change species lists they have used consistently for decades is rarely successful. Here we demonstrate a novel approach for tracking equivalent names and concepts, applied to a network of 10 regional programs that use the same protocols (so-called “Pollard walks”) to monitor butterflies across America north of Mexico. Our system involves, for each monitoring program, associating the taxonomic authority (in this case one of three North American butterfly fauna treatments: Pelham, 2014; North American Butterfly Association, Inc., 2016; Opler & Warren, 2003) that shares the most similar overall taxonomic interpretation to the program’s working species list. This allows us to define each term on each program’s list in the context of the appropriate authority’s species concept and curate the term alongside its authoritative concept. We then aligned the names representing equivalent taxonomic concepts among the three authorities. These stepping stones allow us to bridge a species concept from one program’s species list to the name of the equivalent in any other program, through the intermediary scaffolding of aligned authoritative taxon concepts. Using a software tool we developed to access our curation system, a user can link equivalent species concepts between data collecting agencies with no specialized knowledge of taxonomic complexities. PeerJ Inc. 2020-07-29 /pmc/articles/PMC7395600/ /pubmed/32821528 http://dx.doi.org/10.7717/peerj.9219 Text en © 2020 Campbell et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biodiversity Campbell, Dana L. Thessen, Anne E. Ries, Leslie A novel curation system to facilitate data integration across regional citizen science survey programs |
title | A novel curation system to facilitate data integration across regional citizen science survey programs |
title_full | A novel curation system to facilitate data integration across regional citizen science survey programs |
title_fullStr | A novel curation system to facilitate data integration across regional citizen science survey programs |
title_full_unstemmed | A novel curation system to facilitate data integration across regional citizen science survey programs |
title_short | A novel curation system to facilitate data integration across regional citizen science survey programs |
title_sort | novel curation system to facilitate data integration across regional citizen science survey programs |
topic | Biodiversity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395600/ https://www.ncbi.nlm.nih.gov/pubmed/32821528 http://dx.doi.org/10.7717/peerj.9219 |
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