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An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions
PURPOSE: To develop an automated/objective method for topographically comparing abnormal regions on optical coherence tomography (OCT) and visual field (VF) tests of eyes with early glaucoma. METHODS: A custom R program was developed that allows for both visualization and automatic assessment of the...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396198/ https://www.ncbi.nlm.nih.gov/pubmed/32818101 http://dx.doi.org/10.1167/tvst.9.4.14 |
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author | Tsamis, Emmanouil Bommakanti, Nikhil K. Sun, Ashley Thakoor, Kaveri A. De Moraes, Carlos Gustavo Hood, Donald C. |
author_facet | Tsamis, Emmanouil Bommakanti, Nikhil K. Sun, Ashley Thakoor, Kaveri A. De Moraes, Carlos Gustavo Hood, Donald C. |
author_sort | Tsamis, Emmanouil |
collection | PubMed |
description | PURPOSE: To develop an automated/objective method for topographically comparing abnormal regions on optical coherence tomography (OCT) and visual field (VF) tests of eyes with early glaucoma. METHODS: A custom R program was developed that allows for both visualization and automatic assessment of the topographical agreement between functional (24-2 and/or 10-2 VF) and structural (widefield OCT retinal nerve fiber layer and/or retinal ganglion cell layer) deviation/probability maps. It was optimized using information from 98 eyes: 53 diagnosed as “definitely glaucoma” (DG) and 45 recruited as healthy (H) controls. Different pairs of abnormal VF (P <1%, <2%, <5%) and abnormal OCT (P <5%, <10%, <15%) criteria were evaluated. The percentages of abnormal structure–abnormal function (aS-aF) agreement found in DG eyes and nonagreement found in H eyes were used to define the optimal criteria and number of aS-aF locations for the detection of aS-aF agreement. RESULTS: A criterion of two aS-aF locations with “OCT <10% and VF <5%” on VF pattern deviation (PD) probability and OCT deviation/probability maps yielded high overall agreement (92%) with high aS-aF agreement for the DG eyes (89%) and high aS-aF nonagreement for the H eyes (95%). Total deviation probability maps achieved slightly lower performance than PD maps. CONCLUSIONS: The method described here can automatically and objectively evaluate aS-aF agreement with a direct comparison of abnormal regions of function and structure. TRANSLATIONAL RELEVANCE: As glaucoma diagnosis often involves assessing structure–function agreement, this technique can overcome subjectivity in this assessment. |
format | Online Article Text |
id | pubmed-7396198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-73961982020-08-17 An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions Tsamis, Emmanouil Bommakanti, Nikhil K. Sun, Ashley Thakoor, Kaveri A. De Moraes, Carlos Gustavo Hood, Donald C. Transl Vis Sci Technol Methods PURPOSE: To develop an automated/objective method for topographically comparing abnormal regions on optical coherence tomography (OCT) and visual field (VF) tests of eyes with early glaucoma. METHODS: A custom R program was developed that allows for both visualization and automatic assessment of the topographical agreement between functional (24-2 and/or 10-2 VF) and structural (widefield OCT retinal nerve fiber layer and/or retinal ganglion cell layer) deviation/probability maps. It was optimized using information from 98 eyes: 53 diagnosed as “definitely glaucoma” (DG) and 45 recruited as healthy (H) controls. Different pairs of abnormal VF (P <1%, <2%, <5%) and abnormal OCT (P <5%, <10%, <15%) criteria were evaluated. The percentages of abnormal structure–abnormal function (aS-aF) agreement found in DG eyes and nonagreement found in H eyes were used to define the optimal criteria and number of aS-aF locations for the detection of aS-aF agreement. RESULTS: A criterion of two aS-aF locations with “OCT <10% and VF <5%” on VF pattern deviation (PD) probability and OCT deviation/probability maps yielded high overall agreement (92%) with high aS-aF agreement for the DG eyes (89%) and high aS-aF nonagreement for the H eyes (95%). Total deviation probability maps achieved slightly lower performance than PD maps. CONCLUSIONS: The method described here can automatically and objectively evaluate aS-aF agreement with a direct comparison of abnormal regions of function and structure. TRANSLATIONAL RELEVANCE: As glaucoma diagnosis often involves assessing structure–function agreement, this technique can overcome subjectivity in this assessment. The Association for Research in Vision and Ophthalmology 2020-03-18 /pmc/articles/PMC7396198/ /pubmed/32818101 http://dx.doi.org/10.1167/tvst.9.4.14 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Methods Tsamis, Emmanouil Bommakanti, Nikhil K. Sun, Ashley Thakoor, Kaveri A. De Moraes, Carlos Gustavo Hood, Donald C. An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title | An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title_full | An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title_fullStr | An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title_full_unstemmed | An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title_short | An Automated Method for Assessing Topographical Structure–Function Agreement in Abnormal Glaucomatous Regions |
title_sort | automated method for assessing topographical structure–function agreement in abnormal glaucomatous regions |
topic | Methods |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396198/ https://www.ncbi.nlm.nih.gov/pubmed/32818101 http://dx.doi.org/10.1167/tvst.9.4.14 |
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