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Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma

Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progressio...

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Autores principales: Chen, Shang‐Wei, Lu, Hui‐Ping, Chen, Gang, Yang, Jie, Huang, Wan‐Ying, Wang, Xiang‐Ming, Huang, Shu‐Ping, Gao, Li, Liu, Jun, Fu, Zong‐Wang, Chen, Peng, Zhai, Gao‐Qiang, Luo, Jiao, Li, Xiao‐Jiao, Huang, Zhi‐Guang, Li, Zu‐Yun, Gan, Ting‐Qing, Yang, Da‐Ping, Mo, Wei‐Jia, Zhou, Hua‐Fu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396450/
https://www.ncbi.nlm.nih.gov/pubmed/32598517
http://dx.doi.org/10.1002/2211-5463.12920
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author Chen, Shang‐Wei
Lu, Hui‐Ping
Chen, Gang
Yang, Jie
Huang, Wan‐Ying
Wang, Xiang‐Ming
Huang, Shu‐Ping
Gao, Li
Liu, Jun
Fu, Zong‐Wang
Chen, Peng
Zhai, Gao‐Qiang
Luo, Jiao
Li, Xiao‐Jiao
Huang, Zhi‐Guang
Li, Zu‐Yun
Gan, Ting‐Qing
Yang, Da‐Ping
Mo, Wei‐Jia
Zhou, Hua‐Fu
author_facet Chen, Shang‐Wei
Lu, Hui‐Ping
Chen, Gang
Yang, Jie
Huang, Wan‐Ying
Wang, Xiang‐Ming
Huang, Shu‐Ping
Gao, Li
Liu, Jun
Fu, Zong‐Wang
Chen, Peng
Zhai, Gao‐Qiang
Luo, Jiao
Li, Xiao‐Jiao
Huang, Zhi‐Guang
Li, Zu‐Yun
Gan, Ting‐Qing
Yang, Da‐Ping
Mo, Wei‐Jia
Zhou, Hua‐Fu
author_sort Chen, Shang‐Wei
collection PubMed
description Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progression of lung adenocarcinoma (LUAD). Here, we examined expression of miRNA‐126‐3p in 23 samples from patients with LUSCs and 23 normal control specimens by quantitative real‐time PCR (RT‐qPCR). Associations between miRNA‐126‐3p expression and clinical features were studied from materials derived from Gene Expression Omnibus (GEO) chips and The Cancer Genome Atlas (TCGA) database. Twelve online platforms were used to identify candidate target genes of miRNA‐126‐3p. Further analyses of the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and protein–protein interaction (PPI) network were performed on the target genes. GEO microarray analysis, TCGA data mining, RT‐qPCR, and integration analysis consistently reported low expression of miRNA‐126‐3p in LUSC. A total of 42 genes were identified as potential target genes of miRNA‐126‐3p from online platforms, GEO microarrays, and the TCGA database. GO and KEGG analyses demonstrated that the target genes are involved in several biological processes that promote the progression of LUSC. SOX2, E2F2, and E2F3 were selected as hub genes from the PPI network for further analysis. In summary, our results suggest that the low expression of miRNA‐126‐3p may play a role in promoting the development of LUSC and miRNA‐126‐3p may be a biomarker for LUSC early diagnosis and prognosis.
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spelling pubmed-73964502020-08-06 Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma Chen, Shang‐Wei Lu, Hui‐Ping Chen, Gang Yang, Jie Huang, Wan‐Ying Wang, Xiang‐Ming Huang, Shu‐Ping Gao, Li Liu, Jun Fu, Zong‐Wang Chen, Peng Zhai, Gao‐Qiang Luo, Jiao Li, Xiao‐Jiao Huang, Zhi‐Guang Li, Zu‐Yun Gan, Ting‐Qing Yang, Da‐Ping Mo, Wei‐Jia Zhou, Hua‐Fu FEBS Open Bio Research Articles Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progression of lung adenocarcinoma (LUAD). Here, we examined expression of miRNA‐126‐3p in 23 samples from patients with LUSCs and 23 normal control specimens by quantitative real‐time PCR (RT‐qPCR). Associations between miRNA‐126‐3p expression and clinical features were studied from materials derived from Gene Expression Omnibus (GEO) chips and The Cancer Genome Atlas (TCGA) database. Twelve online platforms were used to identify candidate target genes of miRNA‐126‐3p. Further analyses of the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and protein–protein interaction (PPI) network were performed on the target genes. GEO microarray analysis, TCGA data mining, RT‐qPCR, and integration analysis consistently reported low expression of miRNA‐126‐3p in LUSC. A total of 42 genes were identified as potential target genes of miRNA‐126‐3p from online platforms, GEO microarrays, and the TCGA database. GO and KEGG analyses demonstrated that the target genes are involved in several biological processes that promote the progression of LUSC. SOX2, E2F2, and E2F3 were selected as hub genes from the PPI network for further analysis. In summary, our results suggest that the low expression of miRNA‐126‐3p may play a role in promoting the development of LUSC and miRNA‐126‐3p may be a biomarker for LUSC early diagnosis and prognosis. John Wiley and Sons Inc. 2020-07-14 /pmc/articles/PMC7396450/ /pubmed/32598517 http://dx.doi.org/10.1002/2211-5463.12920 Text en © 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Chen, Shang‐Wei
Lu, Hui‐Ping
Chen, Gang
Yang, Jie
Huang, Wan‐Ying
Wang, Xiang‐Ming
Huang, Shu‐Ping
Gao, Li
Liu, Jun
Fu, Zong‐Wang
Chen, Peng
Zhai, Gao‐Qiang
Luo, Jiao
Li, Xiao‐Jiao
Huang, Zhi‐Guang
Li, Zu‐Yun
Gan, Ting‐Qing
Yang, Da‐Ping
Mo, Wei‐Jia
Zhou, Hua‐Fu
Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title_full Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title_fullStr Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title_full_unstemmed Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title_short Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
title_sort downregulation of mirna‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396450/
https://www.ncbi.nlm.nih.gov/pubmed/32598517
http://dx.doi.org/10.1002/2211-5463.12920
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