Cargando…
Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma
Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progressio...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396450/ https://www.ncbi.nlm.nih.gov/pubmed/32598517 http://dx.doi.org/10.1002/2211-5463.12920 |
_version_ | 1783565586693881856 |
---|---|
author | Chen, Shang‐Wei Lu, Hui‐Ping Chen, Gang Yang, Jie Huang, Wan‐Ying Wang, Xiang‐Ming Huang, Shu‐Ping Gao, Li Liu, Jun Fu, Zong‐Wang Chen, Peng Zhai, Gao‐Qiang Luo, Jiao Li, Xiao‐Jiao Huang, Zhi‐Guang Li, Zu‐Yun Gan, Ting‐Qing Yang, Da‐Ping Mo, Wei‐Jia Zhou, Hua‐Fu |
author_facet | Chen, Shang‐Wei Lu, Hui‐Ping Chen, Gang Yang, Jie Huang, Wan‐Ying Wang, Xiang‐Ming Huang, Shu‐Ping Gao, Li Liu, Jun Fu, Zong‐Wang Chen, Peng Zhai, Gao‐Qiang Luo, Jiao Li, Xiao‐Jiao Huang, Zhi‐Guang Li, Zu‐Yun Gan, Ting‐Qing Yang, Da‐Ping Mo, Wei‐Jia Zhou, Hua‐Fu |
author_sort | Chen, Shang‐Wei |
collection | PubMed |
description | Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progression of lung adenocarcinoma (LUAD). Here, we examined expression of miRNA‐126‐3p in 23 samples from patients with LUSCs and 23 normal control specimens by quantitative real‐time PCR (RT‐qPCR). Associations between miRNA‐126‐3p expression and clinical features were studied from materials derived from Gene Expression Omnibus (GEO) chips and The Cancer Genome Atlas (TCGA) database. Twelve online platforms were used to identify candidate target genes of miRNA‐126‐3p. Further analyses of the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and protein–protein interaction (PPI) network were performed on the target genes. GEO microarray analysis, TCGA data mining, RT‐qPCR, and integration analysis consistently reported low expression of miRNA‐126‐3p in LUSC. A total of 42 genes were identified as potential target genes of miRNA‐126‐3p from online platforms, GEO microarrays, and the TCGA database. GO and KEGG analyses demonstrated that the target genes are involved in several biological processes that promote the progression of LUSC. SOX2, E2F2, and E2F3 were selected as hub genes from the PPI network for further analysis. In summary, our results suggest that the low expression of miRNA‐126‐3p may play a role in promoting the development of LUSC and miRNA‐126‐3p may be a biomarker for LUSC early diagnosis and prognosis. |
format | Online Article Text |
id | pubmed-7396450 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-73964502020-08-06 Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma Chen, Shang‐Wei Lu, Hui‐Ping Chen, Gang Yang, Jie Huang, Wan‐Ying Wang, Xiang‐Ming Huang, Shu‐Ping Gao, Li Liu, Jun Fu, Zong‐Wang Chen, Peng Zhai, Gao‐Qiang Luo, Jiao Li, Xiao‐Jiao Huang, Zhi‐Guang Li, Zu‐Yun Gan, Ting‐Qing Yang, Da‐Ping Mo, Wei‐Jia Zhou, Hua‐Fu FEBS Open Bio Research Articles Lung squamous cell carcinoma (LUSC) is the main pathological type of pulmonary malignant tumors; at present, less than 10% of patients with advanced metastatic LUSC live for more than 5 years. We previously reported that low expression of miRNA‐126‐3p is associated with the occurrence and progression of lung adenocarcinoma (LUAD). Here, we examined expression of miRNA‐126‐3p in 23 samples from patients with LUSCs and 23 normal control specimens by quantitative real‐time PCR (RT‐qPCR). Associations between miRNA‐126‐3p expression and clinical features were studied from materials derived from Gene Expression Omnibus (GEO) chips and The Cancer Genome Atlas (TCGA) database. Twelve online platforms were used to identify candidate target genes of miRNA‐126‐3p. Further analyses of the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and protein–protein interaction (PPI) network were performed on the target genes. GEO microarray analysis, TCGA data mining, RT‐qPCR, and integration analysis consistently reported low expression of miRNA‐126‐3p in LUSC. A total of 42 genes were identified as potential target genes of miRNA‐126‐3p from online platforms, GEO microarrays, and the TCGA database. GO and KEGG analyses demonstrated that the target genes are involved in several biological processes that promote the progression of LUSC. SOX2, E2F2, and E2F3 were selected as hub genes from the PPI network for further analysis. In summary, our results suggest that the low expression of miRNA‐126‐3p may play a role in promoting the development of LUSC and miRNA‐126‐3p may be a biomarker for LUSC early diagnosis and prognosis. John Wiley and Sons Inc. 2020-07-14 /pmc/articles/PMC7396450/ /pubmed/32598517 http://dx.doi.org/10.1002/2211-5463.12920 Text en © 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Chen, Shang‐Wei Lu, Hui‐Ping Chen, Gang Yang, Jie Huang, Wan‐Ying Wang, Xiang‐Ming Huang, Shu‐Ping Gao, Li Liu, Jun Fu, Zong‐Wang Chen, Peng Zhai, Gao‐Qiang Luo, Jiao Li, Xiao‐Jiao Huang, Zhi‐Guang Li, Zu‐Yun Gan, Ting‐Qing Yang, Da‐Ping Mo, Wei‐Jia Zhou, Hua‐Fu Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title | Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title_full | Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title_fullStr | Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title_full_unstemmed | Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title_short | Downregulation of miRNA‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
title_sort | downregulation of mirna‐126‐3p is associated with progression of and poor prognosis for lung squamous cell carcinoma |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7396450/ https://www.ncbi.nlm.nih.gov/pubmed/32598517 http://dx.doi.org/10.1002/2211-5463.12920 |
work_keys_str_mv | AT chenshangwei downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT luhuiping downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT chengang downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT yangjie downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT huangwanying downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT wangxiangming downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT huangshuping downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT gaoli downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT liujun downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT fuzongwang downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT chenpeng downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT zhaigaoqiang downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT luojiao downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT lixiaojiao downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT huangzhiguang downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT lizuyun downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT gantingqing downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT yangdaping downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT moweijia downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma AT zhouhuafu downregulationofmirna1263pisassociatedwithprogressionofandpoorprognosisforlungsquamouscellcarcinoma |