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Big data in IBD: big progress for clinical practice

IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation an...

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Autores principales: Seyed Tabib, Nasim Sadat, Madgwick, Matthew, Sudhakar, Padhmanand, Verstockt, Bram, Korcsmaros, Tamas, Vermeire, Séverine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7398484/
https://www.ncbi.nlm.nih.gov/pubmed/32111636
http://dx.doi.org/10.1136/gutjnl-2019-320065
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author Seyed Tabib, Nasim Sadat
Madgwick, Matthew
Sudhakar, Padhmanand
Verstockt, Bram
Korcsmaros, Tamas
Vermeire, Séverine
author_facet Seyed Tabib, Nasim Sadat
Madgwick, Matthew
Sudhakar, Padhmanand
Verstockt, Bram
Korcsmaros, Tamas
Vermeire, Séverine
author_sort Seyed Tabib, Nasim Sadat
collection PubMed
description IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation and molecular networks have catalysed IBD research. The advent of artificial intelligence, in particular, machine learning, and systems biology has opened the avenue for the efficient integration and interpretation of big datasets for discovering clinically translatable knowledge. In this narrative review, we discuss how big data integration and machine learning have been applied to translational IBD research. Approaches such as machine learning may enable patient stratification, prediction of disease progression and therapy responses for fine-tuning treatment options with positive impacts on cost, health and safety. We also outline the challenges and opportunities presented by machine learning and big data in clinical IBD research.
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spelling pubmed-73984842020-08-17 Big data in IBD: big progress for clinical practice Seyed Tabib, Nasim Sadat Madgwick, Matthew Sudhakar, Padhmanand Verstockt, Bram Korcsmaros, Tamas Vermeire, Séverine Gut Recent Advances in Clinical Practice IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation and molecular networks have catalysed IBD research. The advent of artificial intelligence, in particular, machine learning, and systems biology has opened the avenue for the efficient integration and interpretation of big datasets for discovering clinically translatable knowledge. In this narrative review, we discuss how big data integration and machine learning have been applied to translational IBD research. Approaches such as machine learning may enable patient stratification, prediction of disease progression and therapy responses for fine-tuning treatment options with positive impacts on cost, health and safety. We also outline the challenges and opportunities presented by machine learning and big data in clinical IBD research. BMJ Publishing Group 2020-08 2020-02-28 /pmc/articles/PMC7398484/ /pubmed/32111636 http://dx.doi.org/10.1136/gutjnl-2019-320065 Text en © Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY. Published by BMJ. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution 4.0 Unported (CC BY 4.0) license, which permits others to copy, redistribute, remix, transform and build upon this work for any purpose, provided the original work is properly cited, a link to the licence is given, and indication of whether changes were made. See: https://creativecommons.org/licenses/by/4.0/.
spellingShingle Recent Advances in Clinical Practice
Seyed Tabib, Nasim Sadat
Madgwick, Matthew
Sudhakar, Padhmanand
Verstockt, Bram
Korcsmaros, Tamas
Vermeire, Séverine
Big data in IBD: big progress for clinical practice
title Big data in IBD: big progress for clinical practice
title_full Big data in IBD: big progress for clinical practice
title_fullStr Big data in IBD: big progress for clinical practice
title_full_unstemmed Big data in IBD: big progress for clinical practice
title_short Big data in IBD: big progress for clinical practice
title_sort big data in ibd: big progress for clinical practice
topic Recent Advances in Clinical Practice
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7398484/
https://www.ncbi.nlm.nih.gov/pubmed/32111636
http://dx.doi.org/10.1136/gutjnl-2019-320065
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