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Big data in IBD: big progress for clinical practice
IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation an...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7398484/ https://www.ncbi.nlm.nih.gov/pubmed/32111636 http://dx.doi.org/10.1136/gutjnl-2019-320065 |
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author | Seyed Tabib, Nasim Sadat Madgwick, Matthew Sudhakar, Padhmanand Verstockt, Bram Korcsmaros, Tamas Vermeire, Séverine |
author_facet | Seyed Tabib, Nasim Sadat Madgwick, Matthew Sudhakar, Padhmanand Verstockt, Bram Korcsmaros, Tamas Vermeire, Séverine |
author_sort | Seyed Tabib, Nasim Sadat |
collection | PubMed |
description | IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation and molecular networks have catalysed IBD research. The advent of artificial intelligence, in particular, machine learning, and systems biology has opened the avenue for the efficient integration and interpretation of big datasets for discovering clinically translatable knowledge. In this narrative review, we discuss how big data integration and machine learning have been applied to translational IBD research. Approaches such as machine learning may enable patient stratification, prediction of disease progression and therapy responses for fine-tuning treatment options with positive impacts on cost, health and safety. We also outline the challenges and opportunities presented by machine learning and big data in clinical IBD research. |
format | Online Article Text |
id | pubmed-7398484 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-73984842020-08-17 Big data in IBD: big progress for clinical practice Seyed Tabib, Nasim Sadat Madgwick, Matthew Sudhakar, Padhmanand Verstockt, Bram Korcsmaros, Tamas Vermeire, Séverine Gut Recent Advances in Clinical Practice IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and intrinsic factors, including host genetics, the immune system, environmental factors and the gut microbiome. Technological advancements such as next-generation sequencing, high-throughput omics data generation and molecular networks have catalysed IBD research. The advent of artificial intelligence, in particular, machine learning, and systems biology has opened the avenue for the efficient integration and interpretation of big datasets for discovering clinically translatable knowledge. In this narrative review, we discuss how big data integration and machine learning have been applied to translational IBD research. Approaches such as machine learning may enable patient stratification, prediction of disease progression and therapy responses for fine-tuning treatment options with positive impacts on cost, health and safety. We also outline the challenges and opportunities presented by machine learning and big data in clinical IBD research. BMJ Publishing Group 2020-08 2020-02-28 /pmc/articles/PMC7398484/ /pubmed/32111636 http://dx.doi.org/10.1136/gutjnl-2019-320065 Text en © Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY. Published by BMJ. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution 4.0 Unported (CC BY 4.0) license, which permits others to copy, redistribute, remix, transform and build upon this work for any purpose, provided the original work is properly cited, a link to the licence is given, and indication of whether changes were made. See: https://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Recent Advances in Clinical Practice Seyed Tabib, Nasim Sadat Madgwick, Matthew Sudhakar, Padhmanand Verstockt, Bram Korcsmaros, Tamas Vermeire, Séverine Big data in IBD: big progress for clinical practice |
title | Big data in IBD: big progress for clinical practice |
title_full | Big data in IBD: big progress for clinical practice |
title_fullStr | Big data in IBD: big progress for clinical practice |
title_full_unstemmed | Big data in IBD: big progress for clinical practice |
title_short | Big data in IBD: big progress for clinical practice |
title_sort | big data in ibd: big progress for clinical practice |
topic | Recent Advances in Clinical Practice |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7398484/ https://www.ncbi.nlm.nih.gov/pubmed/32111636 http://dx.doi.org/10.1136/gutjnl-2019-320065 |
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