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Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma

The present study compared the expression levels of limb-bud and heart (LBH) between gastric intestinal-type adenocarcinoma (GITA) and healthy gastric tissues; with the aim of investigating the possible effect of LBH on the prognosis of patients with GITA and to analyze the associated signaling path...

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Autores principales: Wu, Shu-Sheng, Chen, Jian, Yan, Ying, Luo, Hui-Qin, Chen, Wen-Ju, He, Yi-Fu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7400917/
https://www.ncbi.nlm.nih.gov/pubmed/32782537
http://dx.doi.org/10.3892/ol.2020.11778
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author Wu, Shu-Sheng
Chen, Jian
Yan, Ying
Luo, Hui-Qin
Chen, Wen-Ju
He, Yi-Fu
author_facet Wu, Shu-Sheng
Chen, Jian
Yan, Ying
Luo, Hui-Qin
Chen, Wen-Ju
He, Yi-Fu
author_sort Wu, Shu-Sheng
collection PubMed
description The present study compared the expression levels of limb-bud and heart (LBH) between gastric intestinal-type adenocarcinoma (GITA) and healthy gastric tissues; with the aim of investigating the possible effect of LBH on the prognosis of patients with GITA and to analyze the associated signaling pathways in GITA. Three Oncomine gastric datasets were utilized for the preliminary prediction of the expression levels of LBH mRNA in GITA and healthy gastric tissues. Gene expression and corresponding clinical data of 163 patients with GITA were downloaded from The Cancer Genome Atlas. Wilcoxon signed rank-sum test was used to distinguish the clinical value of LBH expression in the various clinicopathological features. Subsequently, Kaplan-Meier univariate and Cox multivariate survival analyses were performed to determine the prognostic significance of LBH expression in patients with GITA. Function enrichment analysis was conducted for the co-expression gene of LBH, defined as correlation coefficient r>0.06 and P<0.05 using Pearson's χ(2) test. Bioinformatics data demonstrated that compared with that in the normal gastric mucosa, LBH mRNA expression was dramatically higher in GITA tissues (P<0.05). There were significant relationships between the differential expression levels of LBH and clinicopathological parameters in GITA patients (all p<0.05), including pathological stage T (T3-4 vs. T1-2), lymph node metastasis (no vs. yes), distant metastasis (no vs. yes), histological grade (grade 3 vs. grades 1–2) and tumor stage (stages 3–4 vs. stages 1–2). Additionally, the overall survival and disease-free survival (DFS) of patients in the high expression group were poorer compared with those in the low expression group (P<0.05). Cox multivariate survival analysis indicated that increased LBH expression was an independent predictor of poor DFS prognosis in patients with GITA (P=0.045). In summary, LBH is highly expressed in GITA, which can be used as an independent predictor of poor prognosis in patients with GITA. LBH co-expressed genes are closely associated with GITA tumor migration and metastasis.
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spelling pubmed-74009172020-08-10 Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma Wu, Shu-Sheng Chen, Jian Yan, Ying Luo, Hui-Qin Chen, Wen-Ju He, Yi-Fu Oncol Lett Articles The present study compared the expression levels of limb-bud and heart (LBH) between gastric intestinal-type adenocarcinoma (GITA) and healthy gastric tissues; with the aim of investigating the possible effect of LBH on the prognosis of patients with GITA and to analyze the associated signaling pathways in GITA. Three Oncomine gastric datasets were utilized for the preliminary prediction of the expression levels of LBH mRNA in GITA and healthy gastric tissues. Gene expression and corresponding clinical data of 163 patients with GITA were downloaded from The Cancer Genome Atlas. Wilcoxon signed rank-sum test was used to distinguish the clinical value of LBH expression in the various clinicopathological features. Subsequently, Kaplan-Meier univariate and Cox multivariate survival analyses were performed to determine the prognostic significance of LBH expression in patients with GITA. Function enrichment analysis was conducted for the co-expression gene of LBH, defined as correlation coefficient r>0.06 and P<0.05 using Pearson's χ(2) test. Bioinformatics data demonstrated that compared with that in the normal gastric mucosa, LBH mRNA expression was dramatically higher in GITA tissues (P<0.05). There were significant relationships between the differential expression levels of LBH and clinicopathological parameters in GITA patients (all p<0.05), including pathological stage T (T3-4 vs. T1-2), lymph node metastasis (no vs. yes), distant metastasis (no vs. yes), histological grade (grade 3 vs. grades 1–2) and tumor stage (stages 3–4 vs. stages 1–2). Additionally, the overall survival and disease-free survival (DFS) of patients in the high expression group were poorer compared with those in the low expression group (P<0.05). Cox multivariate survival analysis indicated that increased LBH expression was an independent predictor of poor DFS prognosis in patients with GITA (P=0.045). In summary, LBH is highly expressed in GITA, which can be used as an independent predictor of poor prognosis in patients with GITA. LBH co-expressed genes are closely associated with GITA tumor migration and metastasis. D.A. Spandidos 2020-09 2020-06-25 /pmc/articles/PMC7400917/ /pubmed/32782537 http://dx.doi.org/10.3892/ol.2020.11778 Text en Copyright: © Wu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Wu, Shu-Sheng
Chen, Jian
Yan, Ying
Luo, Hui-Qin
Chen, Wen-Ju
He, Yi-Fu
Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title_full Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title_fullStr Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title_full_unstemmed Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title_short Limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
title_sort limb-bud and heart as a novel biomarker for gastric intestinal type adenocarcinoma
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7400917/
https://www.ncbi.nlm.nih.gov/pubmed/32782537
http://dx.doi.org/10.3892/ol.2020.11778
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