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Iterative X-ray spectroscopic ptychography
Spectroscopic ptychography is a powerful technique to determine the chemical composition of a sample with high spatial resolution. In spectro-ptychography, a sample is rastered through a focused X-ray beam with varying photon energy so that a series of phaseless diffraction data are recorded. Each c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7401786/ https://www.ncbi.nlm.nih.gov/pubmed/32788901 http://dx.doi.org/10.1107/S1600576720006354 |
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author | Chang, Huibin Rong, Ziqin Enfedaque, Pablo Marchesini, Stefano |
author_facet | Chang, Huibin Rong, Ziqin Enfedaque, Pablo Marchesini, Stefano |
author_sort | Chang, Huibin |
collection | PubMed |
description | Spectroscopic ptychography is a powerful technique to determine the chemical composition of a sample with high spatial resolution. In spectro-ptychography, a sample is rastered through a focused X-ray beam with varying photon energy so that a series of phaseless diffraction data are recorded. Each chemical component in the material under investigation has a characteristic absorption and phase contrast as a function of photon energy. Using a dictionary formed by the set of contrast functions of each energy for each chemical component, it is possible to obtain the chemical composition of the material from high-resolution multi-spectral images. This paper presents SPA (spectroscopic ptychography with alternating direction method of multipliers), a novel algorithm to iteratively solve the spectroscopic blind ptychography problem. First, a nonlinear spectro-ptychography model based on Poisson maximum likelihood is designed, and then the proposed method is constructed on the basis of fast iterative splitting operators. SPA can be used to retrieve spectral contrast when considering either a known or an incomplete (partially known) dictionary of reference spectra. By coupling the redundancy across different spectral measurements, the proposed algorithm can achieve higher reconstruction quality when compared with standard state-of-the-art two-step methods. It is demonstrated how SPA can recover accurate chemical maps from Poisson-noised measurements, and its enhanced robustness when reconstructing reduced-redundancy ptychography data using large scanning step sizes is shown. |
format | Online Article Text |
id | pubmed-7401786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-74017862020-08-11 Iterative X-ray spectroscopic ptychography Chang, Huibin Rong, Ziqin Enfedaque, Pablo Marchesini, Stefano J Appl Crystallogr Research Papers Spectroscopic ptychography is a powerful technique to determine the chemical composition of a sample with high spatial resolution. In spectro-ptychography, a sample is rastered through a focused X-ray beam with varying photon energy so that a series of phaseless diffraction data are recorded. Each chemical component in the material under investigation has a characteristic absorption and phase contrast as a function of photon energy. Using a dictionary formed by the set of contrast functions of each energy for each chemical component, it is possible to obtain the chemical composition of the material from high-resolution multi-spectral images. This paper presents SPA (spectroscopic ptychography with alternating direction method of multipliers), a novel algorithm to iteratively solve the spectroscopic blind ptychography problem. First, a nonlinear spectro-ptychography model based on Poisson maximum likelihood is designed, and then the proposed method is constructed on the basis of fast iterative splitting operators. SPA can be used to retrieve spectral contrast when considering either a known or an incomplete (partially known) dictionary of reference spectra. By coupling the redundancy across different spectral measurements, the proposed algorithm can achieve higher reconstruction quality when compared with standard state-of-the-art two-step methods. It is demonstrated how SPA can recover accurate chemical maps from Poisson-noised measurements, and its enhanced robustness when reconstructing reduced-redundancy ptychography data using large scanning step sizes is shown. International Union of Crystallography 2020-07-08 /pmc/articles/PMC7401786/ /pubmed/32788901 http://dx.doi.org/10.1107/S1600576720006354 Text en © Huibin Chang et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Chang, Huibin Rong, Ziqin Enfedaque, Pablo Marchesini, Stefano Iterative X-ray spectroscopic ptychography |
title | Iterative X-ray spectroscopic ptychography
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title_full | Iterative X-ray spectroscopic ptychography
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title_fullStr | Iterative X-ray spectroscopic ptychography
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title_full_unstemmed | Iterative X-ray spectroscopic ptychography
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title_short | Iterative X-ray spectroscopic ptychography
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title_sort | iterative x-ray spectroscopic ptychography |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7401786/ https://www.ncbi.nlm.nih.gov/pubmed/32788901 http://dx.doi.org/10.1107/S1600576720006354 |
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