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The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera

BACKGROUND: The use of DNA barcoding allows unprecedented advances in biodiversity assessments and monitoring schemes of freshwater ecosystems; nevertheless, it requires the construction of comprehensive reference collections of DNA sequences that represent the existing biodiversity. Plecoptera are...

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Autores principales: Ferreira, Sonia, Tierno de Figueroa, José Manuel, Martins, Filipa MS, Verissimo, Joana, Quaglietta, Lorenzo, Grosso-Silva, José Manuel, Lopes, Pedro B, Sousa, Pedro, Paupério, Joana, Fonseca, Nuno A, Beja, Pedro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403161/
https://www.ncbi.nlm.nih.gov/pubmed/32821214
http://dx.doi.org/10.3897/BDJ.8.e55137
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author Ferreira, Sonia
Tierno de Figueroa, José Manuel
Martins, Filipa MS
Verissimo, Joana
Quaglietta, Lorenzo
Grosso-Silva, José Manuel
Lopes, Pedro B
Sousa, Pedro
Paupério, Joana
Fonseca, Nuno A
Beja, Pedro
author_facet Ferreira, Sonia
Tierno de Figueroa, José Manuel
Martins, Filipa MS
Verissimo, Joana
Quaglietta, Lorenzo
Grosso-Silva, José Manuel
Lopes, Pedro B
Sousa, Pedro
Paupério, Joana
Fonseca, Nuno A
Beja, Pedro
author_sort Ferreira, Sonia
collection PubMed
description BACKGROUND: The use of DNA barcoding allows unprecedented advances in biodiversity assessments and monitoring schemes of freshwater ecosystems; nevertheless, it requires the construction of comprehensive reference collections of DNA sequences that represent the existing biodiversity. Plecoptera are considered particularly good ecological indicators and one of the most endangered groups of insects, but very limited information on their DNA barcodes is available in public databases. Currently, less than 50% of the Iberian species are represented in BOLD. NEW INFORMATION: The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera dataset contains records of 71 specimens of Plecoptera. All specimens have been morphologically identified to species level and belong to 29 species in total. This dataset contributes to the knowledge on the DNA barcodes and distribution of Plecoptera from the Iberian Peninsula and it is one of the IBI database public releases that makes available genetic and distribution data for a series of taxa. The species represented in this dataset correspond to an addition to public databases of 17 species and 21 BINs. Fifty-eight specimens were collected in Portugal and 18 in Spain during the period of 2004 to 2018. All specimens are deposited in the IBI collection at CIBIO, Research Center in Biodiversity and Genetic Resources and their DNA barcodes are publicly available in the Barcode of Life Data System (BOLD) online database. The distribution dataset can be freely accessed through the Global Biodiversity Information Facility (GBIF).
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spelling pubmed-74031612020-08-19 The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera Ferreira, Sonia Tierno de Figueroa, José Manuel Martins, Filipa MS Verissimo, Joana Quaglietta, Lorenzo Grosso-Silva, José Manuel Lopes, Pedro B Sousa, Pedro Paupério, Joana Fonseca, Nuno A Beja, Pedro Biodivers Data J Data Paper (Biosciences) BACKGROUND: The use of DNA barcoding allows unprecedented advances in biodiversity assessments and monitoring schemes of freshwater ecosystems; nevertheless, it requires the construction of comprehensive reference collections of DNA sequences that represent the existing biodiversity. Plecoptera are considered particularly good ecological indicators and one of the most endangered groups of insects, but very limited information on their DNA barcodes is available in public databases. Currently, less than 50% of the Iberian species are represented in BOLD. NEW INFORMATION: The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera dataset contains records of 71 specimens of Plecoptera. All specimens have been morphologically identified to species level and belong to 29 species in total. This dataset contributes to the knowledge on the DNA barcodes and distribution of Plecoptera from the Iberian Peninsula and it is one of the IBI database public releases that makes available genetic and distribution data for a series of taxa. The species represented in this dataset correspond to an addition to public databases of 17 species and 21 BINs. Fifty-eight specimens were collected in Portugal and 18 in Spain during the period of 2004 to 2018. All specimens are deposited in the IBI collection at CIBIO, Research Center in Biodiversity and Genetic Resources and their DNA barcodes are publicly available in the Barcode of Life Data System (BOLD) online database. The distribution dataset can be freely accessed through the Global Biodiversity Information Facility (GBIF). Pensoft Publishers 2020-07-07 /pmc/articles/PMC7403161/ /pubmed/32821214 http://dx.doi.org/10.3897/BDJ.8.e55137 Text en Sonia Ferreira, José Manuel Tierno de Figueroa, Filipa MS Martins, Joana Verissimo, Lorenzo Quaglietta, José Manuel Grosso-Silva, Pedro B Lopes, Pedro Sousa, Joana Paupério, Nuno A Fonseca, Pedro Beja http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Data Paper (Biosciences)
Ferreira, Sonia
Tierno de Figueroa, José Manuel
Martins, Filipa MS
Verissimo, Joana
Quaglietta, Lorenzo
Grosso-Silva, José Manuel
Lopes, Pedro B
Sousa, Pedro
Paupério, Joana
Fonseca, Nuno A
Beja, Pedro
The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title_full The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title_fullStr The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title_full_unstemmed The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title_short The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera
title_sort inbio barcoding initiative database: contribution to the knowledge on dna barcodes of iberian plecoptera
topic Data Paper (Biosciences)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403161/
https://www.ncbi.nlm.nih.gov/pubmed/32821214
http://dx.doi.org/10.3897/BDJ.8.e55137
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