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The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors

BACKGROUND: Estrogen receptor (ER) is essential in reproductive development and is also the primary driver of breast cancers. Deregulation of ER may also be involved in tumorigenesis of other organs. To understand the role of ER in different tumor types, pan‐cancer analysis of estrogen receptor alph...

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Autores principales: Hu, Chao, Liu, Yinhua, Jiang, Shan, Chen, Hongjin, Xu, Haojun, Hu, Junhong, Li, Congzhu, Xia, Hongping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403838/
https://www.ncbi.nlm.nih.gov/pubmed/32536040
http://dx.doi.org/10.1002/ctm2.49
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author Hu, Chao
Liu, Yinhua
Jiang, Shan
Chen, Hongjin
Xu, Haojun
Hu, Junhong
Li, Congzhu
Xia, Hongping
author_facet Hu, Chao
Liu, Yinhua
Jiang, Shan
Chen, Hongjin
Xu, Haojun
Hu, Junhong
Li, Congzhu
Xia, Hongping
author_sort Hu, Chao
collection PubMed
description BACKGROUND: Estrogen receptor (ER) is essential in reproductive development and is also the primary driver of breast cancers. Deregulation of ER may also be involved in tumorigenesis of other organs. To understand the role of ER in different tumor types, pan‐cancer analysis of estrogen receptor alpha (ESR1) and estrogen receptor beta (ESR2) in various tumors and association with patients' survival were conducted using The Cancer Genome Atlas (TCGA) data. RESULTS: Gene methylation level was evaluated by the mean methylation level of CpG sites in the promoter region. The significant different DNA methylation between tumor and healthy tissues was shown in 10 tumor types for ESR1 and eight tumor types for ESR2. The methylation pattern was also varied across different TCGA tumors. The pan‐cancer analysis showed significantly different mRNA expression of ESR1 in nine tumor types and ESR2 in four tumor types. Survival analysis showed that the effects of ERs expression on survival are diverse in different tumors. The expression of ERs was associated with tumor molecular subtypes and various clinical characteristics. ER correlated genes were mainly enriched in cancer and immune‐related pathways. CONCLUSIONS: Our pan‐cancer analysis data indicated that ERs might be significantly associated with carcinogenesis and progression of some tumors, which may be potential therapeutic targets and prognosis biomarkers.
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spelling pubmed-74038382020-08-06 The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors Hu, Chao Liu, Yinhua Jiang, Shan Chen, Hongjin Xu, Haojun Hu, Junhong Li, Congzhu Xia, Hongping Clin Transl Med Research Articles BACKGROUND: Estrogen receptor (ER) is essential in reproductive development and is also the primary driver of breast cancers. Deregulation of ER may also be involved in tumorigenesis of other organs. To understand the role of ER in different tumor types, pan‐cancer analysis of estrogen receptor alpha (ESR1) and estrogen receptor beta (ESR2) in various tumors and association with patients' survival were conducted using The Cancer Genome Atlas (TCGA) data. RESULTS: Gene methylation level was evaluated by the mean methylation level of CpG sites in the promoter region. The significant different DNA methylation between tumor and healthy tissues was shown in 10 tumor types for ESR1 and eight tumor types for ESR2. The methylation pattern was also varied across different TCGA tumors. The pan‐cancer analysis showed significantly different mRNA expression of ESR1 in nine tumor types and ESR2 in four tumor types. Survival analysis showed that the effects of ERs expression on survival are diverse in different tumors. The expression of ERs was associated with tumor molecular subtypes and various clinical characteristics. ER correlated genes were mainly enriched in cancer and immune‐related pathways. CONCLUSIONS: Our pan‐cancer analysis data indicated that ERs might be significantly associated with carcinogenesis and progression of some tumors, which may be potential therapeutic targets and prognosis biomarkers. John Wiley and Sons Inc. 2020-06-14 /pmc/articles/PMC7403838/ /pubmed/32536040 http://dx.doi.org/10.1002/ctm2.49 Text en © 2020 The Authors. Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Hu, Chao
Liu, Yinhua
Jiang, Shan
Chen, Hongjin
Xu, Haojun
Hu, Junhong
Li, Congzhu
Xia, Hongping
The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title_full The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title_fullStr The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title_full_unstemmed The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title_short The variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
title_sort variable association between expression and methylation of estrogen receptors and the survival of patients with different tumors
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403838/
https://www.ncbi.nlm.nih.gov/pubmed/32536040
http://dx.doi.org/10.1002/ctm2.49
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