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Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer
Cervical cancer (CC) is one of the most prevalent types of cancer affecting females worldwide. However, the molecular mechanisms underlying the development and progression of CC remains to be elucidated. Taking the high incidence and mortality rates amongst women into consideration, the identificati...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403841/ https://www.ncbi.nlm.nih.gov/pubmed/32765860 http://dx.doi.org/10.3892/br.2020.1328 |
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author | Zhao, Qinfei Li, Huaying Zhu, Longyu Hu, Suping Xi, Xuxiang Liu, Yanmei Liu, Jianfeng Zhong, Tianyu |
author_facet | Zhao, Qinfei Li, Huaying Zhu, Longyu Hu, Suping Xi, Xuxiang Liu, Yanmei Liu, Jianfeng Zhong, Tianyu |
author_sort | Zhao, Qinfei |
collection | PubMed |
description | Cervical cancer (CC) is one of the most prevalent types of cancer affecting females worldwide. However, the molecular mechanisms underlying the development and progression of CC remains to be elucidated. Taking the high incidence and mortality rates amongst women into consideration, the identification of novel biomarkers to prevent CC is of great significance and required to improve diagnosis. Using three raw microarray datasets from the Gene Expression Omnibus database, 188 differentially expressed genes (DEGs) were identified. Gene Ontology and pathway analyses were performed on the DEGs. Through protein-protein interaction network construction and module analysis, eight hub genes [cell division cycle 6, cyclin-dependent kinase 1 (CDK1), cell division control protein 45, budding uninhibited by benzimidazoles 1 (BUB1), DNA topoisomerase II α (TOP2A) and minichromosome maintenance complex component 4, CCNB2 and CCNB1] were identified, but only TOP2A was considered a prognostic factor in survival analysis. There were strong positive correlations between TOP2A and BUB1 (P<0.0001, rs=0.635), CDK1 (P<0.0001, rs=0.511), centromere protein F (CENPF) (P<0.0001, rs=0.677), Rac GTPase activating protein 1 (RACGAP1) (P<0.0001, rs=0.612), F-box protein 5 (FBXO5) (P<0.0001, rs=0.585) and BUB1 mitotic checkpoint serine/threonine kinase B (BUB1B) (P<0.0001, rs=0.584). Additionally, BUB1, CDK1, CENPF, RACGAP1, FBXO5 and BUB1B are all potentially suitable candidate targets for the diagnosis and treatment of CC. In conclusion, the present study identified TOP2A as a potential tumor oncogene and a biomarker for the prognosis of CC. |
format | Online Article Text |
id | pubmed-7403841 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-74038412020-08-05 Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer Zhao, Qinfei Li, Huaying Zhu, Longyu Hu, Suping Xi, Xuxiang Liu, Yanmei Liu, Jianfeng Zhong, Tianyu Biomed Rep Articles Cervical cancer (CC) is one of the most prevalent types of cancer affecting females worldwide. However, the molecular mechanisms underlying the development and progression of CC remains to be elucidated. Taking the high incidence and mortality rates amongst women into consideration, the identification of novel biomarkers to prevent CC is of great significance and required to improve diagnosis. Using three raw microarray datasets from the Gene Expression Omnibus database, 188 differentially expressed genes (DEGs) were identified. Gene Ontology and pathway analyses were performed on the DEGs. Through protein-protein interaction network construction and module analysis, eight hub genes [cell division cycle 6, cyclin-dependent kinase 1 (CDK1), cell division control protein 45, budding uninhibited by benzimidazoles 1 (BUB1), DNA topoisomerase II α (TOP2A) and minichromosome maintenance complex component 4, CCNB2 and CCNB1] were identified, but only TOP2A was considered a prognostic factor in survival analysis. There were strong positive correlations between TOP2A and BUB1 (P<0.0001, rs=0.635), CDK1 (P<0.0001, rs=0.511), centromere protein F (CENPF) (P<0.0001, rs=0.677), Rac GTPase activating protein 1 (RACGAP1) (P<0.0001, rs=0.612), F-box protein 5 (FBXO5) (P<0.0001, rs=0.585) and BUB1 mitotic checkpoint serine/threonine kinase B (BUB1B) (P<0.0001, rs=0.584). Additionally, BUB1, CDK1, CENPF, RACGAP1, FBXO5 and BUB1B are all potentially suitable candidate targets for the diagnosis and treatment of CC. In conclusion, the present study identified TOP2A as a potential tumor oncogene and a biomarker for the prognosis of CC. D.A. Spandidos 2020-10 2020-07-09 /pmc/articles/PMC7403841/ /pubmed/32765860 http://dx.doi.org/10.3892/br.2020.1328 Text en Copyright: © Zhao et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhao, Qinfei Li, Huaying Zhu, Longyu Hu, Suping Xi, Xuxiang Liu, Yanmei Liu, Jianfeng Zhong, Tianyu Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title | Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title_full | Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title_fullStr | Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title_full_unstemmed | Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title_short | Bioinformatics analysis shows that TOP2A functions as a key candidate gene in the progression of cervical cancer |
title_sort | bioinformatics analysis shows that top2a functions as a key candidate gene in the progression of cervical cancer |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403841/ https://www.ncbi.nlm.nih.gov/pubmed/32765860 http://dx.doi.org/10.3892/br.2020.1328 |
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