Cargando…

Computational advances of tumor marker selection and sample classification in cancer proteomics

Cancer proteomics has become a powerful technique for characterizing the protein markers driving transformation of malignancy, tracing proteome variation triggered by therapeutics, and discovering the novel targets and drugs for the treatment of oncologic diseases. To facilitate cancer diagnosis/pro...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tang, Jing, Wang, Yunxia, Luo, Yongchao, Fu, Jianbo, Zhang, Yang, Li, Yi, Xiao, Ziyu, Lou, Yan, Qiu, Yunqing, Zhu, Feng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Research Network of Computational and Structural Biotechnology 2020
Materias:	Review Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7403885/ https://www.ncbi.nlm.nih.gov/pubmed/32802273 http://dx.doi.org/10.1016/j.csbj.2020.07.009

Ejemplares similares

Biomarker Discovery for Immunotherapy of Pituitary Adenomas: Enhanced Robustness and Prediction Ability by Modern Computational Tools
por: Yang, Qingxia, et al.
Publicado: (2019)

Is Bagging Effective in the Classification of Small-Sample Genomic and Proteomic Data?
por: Vu, TT, et al.
Publicado: (2009)

Bottom-Up Proteomics: Advancements in Sample Preparation
por: Duong, Van-An, et al.
Publicado: (2023)

Computational Intelligence Paradigms in Advanced Pattern Classification
por: Ogiela, Marek, et al.
Publicado: (2012)

Classification of Cells in CTC-Enriched Samples by Advanced Image Analysis
por: de Wit, Sanne, et al.
Publicado: (2018)

Proteomic-Based Biosignatures in Breast Cancer Classification and Prediction of Therapeutic Response
por: He, Jianbo, et al.
Publicado: (2011)

Microarrays and molecular markers for tumor classification
por: Ring, Brian Z, et al.
Publicado: (2002)

Membrane marker selection for segmenting single cell spatial proteomics data
por: Dayao, Monica T., et al.
Publicado: (2022)

Predictive value of proteomic markers for advanced rectal cancer with neoadjuvant chemoradiotherapy
por: Wang, Hanyang, et al.
Publicado: (2022)

Cardiovascular proteomics in the era of big data: experimental and computational advances
por: Lam, Maggie P. Y., et al.
Publicado: (2016)

Plasma membrane proteomic analysis of human Gastric Cancer tissues: revealing flotillin 1 as a marker for Gastric Cancer
por: Gao, Wen, et al.
Publicado: (2015)

Selecting Classification Methods for Small Samples of Next-Generation Sequencing Data
por: Zhu, Jiadi, et al.
Publicado: (2021)

Bayesian Classification of Proteomics Biomarkers from Selected Reaction Monitoring Data using an Approximate Bayesian Computation-Markov Chain Monte Carlo Approach
por: Nagaraja, Kashyap, et al.
Publicado: (2018)

Proteomic Analysis of Prostate Cancer FFPE Samples Reveals Markers of Disease Progression and Aggressiveness
por: Lygirou, Vasiliki, et al.
Publicado: (2022)

The impact of sample size and marker selection on the study of haplotype structures
por: Sun, Xiao, et al.
Publicado: (2004)

Discovery of Tumor Markers for Gastric Cancer by Proteomics
por: Wu, Jeng-Yih, et al.
Publicado: (2014)

Is the Proteome of Bronchoalveolar Lavage Extracellular Vesicles a Marker of Advanced Lung Cancer?
por: Carvalho, Ana Sofia, et al.
Publicado: (2020)

Development and Validation of Tumor Marker Indices in Advanced Gastric Cancer Patients
por: Zhang, Jiaqi, et al.
Publicado: (2023)

Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data
por: Zhang, Xuegong, et al.
Publicado: (2006)

Selection of Optimal Ancestry Informative Markers for Classification and Ancestry Proportion Estimation in Pigs
por: Liang, Zuoxiang, et al.
Publicado: (2019)

On the classification and selection of small- to medium-sized computers for real-time applications
por: Pensom, C F
Publicado: (1977)

Sparse Proteomics Analysis – a compressed sensing-based approach for feature selection and classification of high-dimensional proteomics mass spectrometry data
por: Conrad, Tim O. F., et al.
Publicado: (2017)

Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics
por: Lou, Ronghui, et al.
Publicado: (2023)

Selecting Sample Preparation Workflows for Mass Spectrometry-Based Proteomic and Phosphoproteomic Analysis of Patient Samples with Acute Myeloid Leukemia
por: Hernandez-Valladares, Maria, et al.
Publicado: (2016)

The Most Recent Advances in the Application of Nano-Structures/Nano-Materials for Single-Cell Sampling
por: Xu, Xiaolong, et al.
Publicado: (2020)

Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray data
por: Wang, Junbai, et al.
Publicado: (2003)

Classification of Plant Associated Bacteria Using RIF, a Computationally Derived DNA Marker
por: Schneider, Kevin L., et al.
Publicado: (2011)

Nanodiamond for Sample Preparation in Proteomics
por: Perona Martinez, Felipe, et al.
Publicado: (2019)

Classification of epileptic EEG signals based on simple random sampling and sequential feature selection
por: Ghayab, Hadi Ratham Al, et al.
Publicado: (2016)

Editorial: Computational Proteomics and Integration of Data Resources for Advanced Studies in Life Sciences
por: Marabotti, Anna, et al.
Publicado: (2021)

Hybrid Spectral Library Combining DIA-MS Data and a Targeted Virtual Library Substantially Deepens the Proteome Coverage
por: Lou, Ronghui, et al.
Publicado: (2020)

Proteomics Advances in the Understanding of Pollen–Pistil Interactions
por: Fu, Ziyang, et al.
Publicado: (2014)

Advanced sampling theory with applications: how Michael ‘selected’ Amy
por: Singh, Sarjinder
Publicado: (2003)

High‐throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification
por: Zhu, Yi, et al.
Publicado: (2019)

Miniprep assisted proteomics (MAP) for rapid proteomics sample preparation
por: Mousseau, C. Bruce, et al.
Publicado: (2022)

Introduction to Computational Proteomics
por: Colinge, Jacques, et al.
Publicado: (2007)

Plant phosphomannose isomerase as a selectable marker for rice transformation
por: Hu, Lei, et al.
Publicado: (2016)

Selective Intratumoral Drug Release and Simultaneous Inhibition of Oxidative Stress by a Highly Reductive Nanosystem and Its Application as an Anti-tumor Agent
por: Zhu, Chunqi, et al.
Publicado: (2020)

Classification of domains in predicted structures of the human proteome
por: Schaeffer, R. Dustin, et al.
Publicado: (2023)

Candidates for Tumor Markers of Cervical Cancer Discovered by Proteomic Analysis
por: Song, Jae Yun, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_f49gdv9tv1tru94hnq70nbsofm