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Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate

The title morpholino­chlorin, C(46)H(16)F(20)N(4)O(3), was crystallized from hexa­ne/methyl­ene chloride as its 0.44 methyl­ene chloride solvate, C(46)H(16)F(20)N(4)O(3)·0.44CH(2)Cl(2). The morpholino­chlorin was synthesized by stepwise oxygen insertion into a porphyrin using a ‘breaking and mending...

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Autores principales: Churchill, Serena B. S., Sharma, Meenakshi, Brückner, Christian, Zeller, Matthias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405590/
https://www.ncbi.nlm.nih.gov/pubmed/32844003
http://dx.doi.org/10.1107/S2056989020009093
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author Churchill, Serena B. S.
Sharma, Meenakshi
Brückner, Christian
Zeller, Matthias
author_facet Churchill, Serena B. S.
Sharma, Meenakshi
Brückner, Christian
Zeller, Matthias
author_sort Churchill, Serena B. S.
collection PubMed
description The title morpholino­chlorin, C(46)H(16)F(20)N(4)O(3), was crystallized from hexa­ne/methyl­ene chloride as its 0.44 methyl­ene chloride solvate, C(46)H(16)F(20)N(4)O(3)·0.44CH(2)Cl(2). The morpholino­chlorin was synthesized by stepwise oxygen insertion into a porphyrin using a ‘breaking and mending strategy’: NaIO(4)-induced diol cleavage of the corresponding 2,3-di­hydroxy­chlorin with in situ methanol-induced, acid-catalyzed intra­molecular ring closure of the inter­mediate secochlorins bis­aldehyde. Formally, one of the pyrrolic building blocks was thus replaced by a 2,3-di­meth­oxy­morpholine moiety. Like other morpholino­chlorins, the macrocycle of the title compound adopts a ruffled conformation, and the modulation of the porphyrinic π-system chromophore induces a red-shift of its optical spectrum compared to its corresponding chlorin analog. Packing in the crystal is governed by inter­actions involving the fluorine atoms of the penta­fluoro­phenyl substituents, dominated by C—H⋯F inter­actions, and augmented by short fluorine⋯fluorine contacts, C—F⋯π inter­actions, and one severely slipped π-stacking inter­action between two penta­fluoro­phenyl rings. The solvate methyl­ene chloride mol­ecule is disordered over two independent positions around an inversion center with occupancies of two × 0.241 (5) and two × 0.199 (4), for a total site occupancy of 88%.
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spelling pubmed-74055902020-08-24 Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate Churchill, Serena B. S. Sharma, Meenakshi Brückner, Christian Zeller, Matthias Acta Crystallogr E Crystallogr Commun Research Communications The title morpholino­chlorin, C(46)H(16)F(20)N(4)O(3), was crystallized from hexa­ne/methyl­ene chloride as its 0.44 methyl­ene chloride solvate, C(46)H(16)F(20)N(4)O(3)·0.44CH(2)Cl(2). The morpholino­chlorin was synthesized by stepwise oxygen insertion into a porphyrin using a ‘breaking and mending strategy’: NaIO(4)-induced diol cleavage of the corresponding 2,3-di­hydroxy­chlorin with in situ methanol-induced, acid-catalyzed intra­molecular ring closure of the inter­mediate secochlorins bis­aldehyde. Formally, one of the pyrrolic building blocks was thus replaced by a 2,3-di­meth­oxy­morpholine moiety. Like other morpholino­chlorins, the macrocycle of the title compound adopts a ruffled conformation, and the modulation of the porphyrinic π-system chromophore induces a red-shift of its optical spectrum compared to its corresponding chlorin analog. Packing in the crystal is governed by inter­actions involving the fluorine atoms of the penta­fluoro­phenyl substituents, dominated by C—H⋯F inter­actions, and augmented by short fluorine⋯fluorine contacts, C—F⋯π inter­actions, and one severely slipped π-stacking inter­action between two penta­fluoro­phenyl rings. The solvate methyl­ene chloride mol­ecule is disordered over two independent positions around an inversion center with occupancies of two × 0.241 (5) and two × 0.199 (4), for a total site occupancy of 88%. International Union of Crystallography 2020-07-07 /pmc/articles/PMC7405590/ /pubmed/32844003 http://dx.doi.org/10.1107/S2056989020009093 Text en © Churchill et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Churchill, Serena B. S.
Sharma, Meenakshi
Brückner, Christian
Zeller, Matthias
Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title_full Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title_fullStr Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title_full_unstemmed Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title_short Crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
title_sort crystal structure of 2,3-dimeth­oxy-meso-tetra­kis(penta­fluoro­phen­yl)morpholino­chlorin methyl­ene chloride 0.44-solvate
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405590/
https://www.ncbi.nlm.nih.gov/pubmed/32844003
http://dx.doi.org/10.1107/S2056989020009093
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