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MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients
Background: MMP25 is a critical gene of matrix metalloproteinases (MMPs). However, the molecular mechanism of MMP25 in head and neck cancer pathogenesis remains unclear. Methods: MMP25 expression was analyzed using The Cancer Genome Atlas (TCGA) database, and its influence on clinical prognosis was...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405909/ https://www.ncbi.nlm.nih.gov/pubmed/32850314 http://dx.doi.org/10.3389/fonc.2020.01088 |
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author | Liang, Yujie Guan, Chenyu Li, Kan Zheng, Guangsen Wang, Tao Zhang, Sien Liao, Guiqing |
author_facet | Liang, Yujie Guan, Chenyu Li, Kan Zheng, Guangsen Wang, Tao Zhang, Sien Liao, Guiqing |
author_sort | Liang, Yujie |
collection | PubMed |
description | Background: MMP25 is a critical gene of matrix metalloproteinases (MMPs). However, the molecular mechanism of MMP25 in head and neck cancer pathogenesis remains unclear. Methods: MMP25 expression was analyzed using The Cancer Genome Atlas (TCGA) database, and its influence on clinical prognosis was performed using Kaplan–Meier and Cox regression analyses. The correlation between MMP25 and immune infiltration was investigated by CIBERSORT, TIMER, and ESTIMATE. In addition, the relationship between MMP25 expression and molecular mechanisms was analyzed by gene set enrichment analysis (GSEA), gene ontology (GO), and weighted gene co-expression network analysis (WGCNA). Results: MMP25 expression level correlated with prognosis and immune infiltrating levels, especially activated CD4(+) memory T cells, in head and neck cancer. Moreover, MMP25 expression potentially mediated genes, such as IRF8, IKZF1, and DOCK2, and tumor-associated pathways, including p53 signaling, PI3K/AKT/mTOR signaling, and JAK/STAT signaling pathway. Conclusions: These findings suggested that MMP25 plays a critical role in the prognosis and immune infiltration level of head and neck cancer. In addition, MMP25 expression significantly correlated with the regulation of various oncogenes and tumor-related pathways. |
format | Online Article Text |
id | pubmed-7405909 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74059092020-08-25 MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients Liang, Yujie Guan, Chenyu Li, Kan Zheng, Guangsen Wang, Tao Zhang, Sien Liao, Guiqing Front Oncol Oncology Background: MMP25 is a critical gene of matrix metalloproteinases (MMPs). However, the molecular mechanism of MMP25 in head and neck cancer pathogenesis remains unclear. Methods: MMP25 expression was analyzed using The Cancer Genome Atlas (TCGA) database, and its influence on clinical prognosis was performed using Kaplan–Meier and Cox regression analyses. The correlation between MMP25 and immune infiltration was investigated by CIBERSORT, TIMER, and ESTIMATE. In addition, the relationship between MMP25 expression and molecular mechanisms was analyzed by gene set enrichment analysis (GSEA), gene ontology (GO), and weighted gene co-expression network analysis (WGCNA). Results: MMP25 expression level correlated with prognosis and immune infiltrating levels, especially activated CD4(+) memory T cells, in head and neck cancer. Moreover, MMP25 expression potentially mediated genes, such as IRF8, IKZF1, and DOCK2, and tumor-associated pathways, including p53 signaling, PI3K/AKT/mTOR signaling, and JAK/STAT signaling pathway. Conclusions: These findings suggested that MMP25 plays a critical role in the prognosis and immune infiltration level of head and neck cancer. In addition, MMP25 expression significantly correlated with the regulation of various oncogenes and tumor-related pathways. Frontiers Media S.A. 2020-07-29 /pmc/articles/PMC7405909/ /pubmed/32850314 http://dx.doi.org/10.3389/fonc.2020.01088 Text en Copyright © 2020 Liang, Guan, Li, Zheng, Wang, Zhang and Liao. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Liang, Yujie Guan, Chenyu Li, Kan Zheng, Guangsen Wang, Tao Zhang, Sien Liao, Guiqing MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title | MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title_full | MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title_fullStr | MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title_full_unstemmed | MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title_short | MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients |
title_sort | mmp25 regulates immune infiltration level and survival outcome in head and neck cancer patients |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405909/ https://www.ncbi.nlm.nih.gov/pubmed/32850314 http://dx.doi.org/10.3389/fonc.2020.01088 |
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