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Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker
Mathematical modeling of nystagmus oscillations is a technique with applications in diagnostics, treatment evaluation, and acuity testing. Modeling is a powerful tool for the analysis of nystagmus oscillations but quality assessment of the input data is needed in order to avoid misinterpretation of...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7406538/ https://www.ncbi.nlm.nih.gov/pubmed/32314183 http://dx.doi.org/10.3758/s13428-020-01346-y |
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author | Rosengren, William Nyström, Marcus Hammar, Björn Rahne, Markus Sjödahl, Linnea Stridh, Martin |
author_facet | Rosengren, William Nyström, Marcus Hammar, Björn Rahne, Markus Sjödahl, Linnea Stridh, Martin |
author_sort | Rosengren, William |
collection | PubMed |
description | Mathematical modeling of nystagmus oscillations is a technique with applications in diagnostics, treatment evaluation, and acuity testing. Modeling is a powerful tool for the analysis of nystagmus oscillations but quality assessment of the input data is needed in order to avoid misinterpretation of the modeling results. In this work, we propose a signal quality metric for nystagmus waveforms, the normalized segment error (NSE). The NSE is based on the energy in the error signal between the observed oscillations and a reconstruction from a harmonic sinusoidal model called the normalized waveform model (NWM). A threshold for discrimination between nystagmus oscillations and disturbances is estimated using simulated signals and receiver operator characteristics (ROC). The ROC is optimized to find noisy segments and abrupt waveform and frequency changes in the simulated data that disturb the modeling. The discrimination threshold, 𝜖, obtained from the ROC analysis, is applied to real recordings of nystagmus data in order to determine whether a segment is of high quality or not. The NWM parameters from both the simulated dataset and the nystagmus recordings are analyzed for the two classes suggested by the threshold. The optimized 𝜖 yielded a true-positive rate and a false-positive rate of 0.97 and 0.07, respectively, for the simulated data. The results from the NWM parameter analysis show that they are consistent with the known values of the simulated signals, and that the method estimates similar model parameters when performing analysis of repeated recordings from one subject. |
format | Online Article Text |
id | pubmed-7406538 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-74065382020-08-13 Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker Rosengren, William Nyström, Marcus Hammar, Björn Rahne, Markus Sjödahl, Linnea Stridh, Martin Behav Res Methods Article Mathematical modeling of nystagmus oscillations is a technique with applications in diagnostics, treatment evaluation, and acuity testing. Modeling is a powerful tool for the analysis of nystagmus oscillations but quality assessment of the input data is needed in order to avoid misinterpretation of the modeling results. In this work, we propose a signal quality metric for nystagmus waveforms, the normalized segment error (NSE). The NSE is based on the energy in the error signal between the observed oscillations and a reconstruction from a harmonic sinusoidal model called the normalized waveform model (NWM). A threshold for discrimination between nystagmus oscillations and disturbances is estimated using simulated signals and receiver operator characteristics (ROC). The ROC is optimized to find noisy segments and abrupt waveform and frequency changes in the simulated data that disturb the modeling. The discrimination threshold, 𝜖, obtained from the ROC analysis, is applied to real recordings of nystagmus data in order to determine whether a segment is of high quality or not. The NWM parameters from both the simulated dataset and the nystagmus recordings are analyzed for the two classes suggested by the threshold. The optimized 𝜖 yielded a true-positive rate and a false-positive rate of 0.97 and 0.07, respectively, for the simulated data. The results from the NWM parameter analysis show that they are consistent with the known values of the simulated signals, and that the method estimates similar model parameters when performing analysis of repeated recordings from one subject. Springer US 2020-04-20 2020 /pmc/articles/PMC7406538/ /pubmed/32314183 http://dx.doi.org/10.3758/s13428-020-01346-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Rosengren, William Nyström, Marcus Hammar, Björn Rahne, Markus Sjödahl, Linnea Stridh, Martin Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title | Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title_full | Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title_fullStr | Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title_full_unstemmed | Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title_short | Modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
title_sort | modeling and quality assessment of nystagmus eye movements recorded using an eye-tracker |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7406538/ https://www.ncbi.nlm.nih.gov/pubmed/32314183 http://dx.doi.org/10.3758/s13428-020-01346-y |
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