Cargando…
A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association be...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7408807/ https://www.ncbi.nlm.nih.gov/pubmed/32821522 http://dx.doi.org/10.1167/tvst.9.6.25 |
_version_ | 1783567917586055168 |
---|---|
author | Miller, Brendan Torres, Mina Jiang, Xuejuan McKean-Cowdin, Roberta Nousome, Darryl Kim, Su-Jeong Mehta, Hemal H. Yen, Kelvin Cohen, Pinchas Varma, Rohit |
author_facet | Miller, Brendan Torres, Mina Jiang, Xuejuan McKean-Cowdin, Roberta Nousome, Darryl Kim, Su-Jeong Mehta, Hemal H. Yen, Kelvin Cohen, Pinchas Varma, Rohit |
author_sort | Miller, Brendan |
collection | PubMed |
description | PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association between mitochondrial dysfunction and cataracts. Our purpose was to identify a mitochondrial DNA variant that associated with cataracts in a large-scale Latino population. METHODS: We conducted an MiWAS to identify mitochondrial single-nucleotide polymorphisms that modify cataract risk in nearly 3500 individuals enrolled in the Los Angles Latino Eye Study cohort, the largest Latino-specific cohort with comprehensive cataract data. Our analytic strategy for MiWAS included logistic regression on cataract occurrence while controlling for mitochondrial genetic ancestry, age, and biological sex. RESULTS: We found that MitoG228A (rs41323649) alternative allele carriers experienced a five times greater risk for cataracts compared with reference allele carriers. Alternative allele carriers also developed cataracts earlier in life compared with reference allele carriers. Intracohort cross-validation with 10-fold resampling and five repeats showed that the effect of MitoG228A remained significant. CONCLUSIONS: MitoG228A increased risk for cataracts five-fold in approximately 3500 Latinos. To the best of our knowledge, this is the first cataract MiWAS on a large-scale Latino population. This association needs to be validated in an independent cohort. TRANSLATIONAL RELEVANCE: Our discovery hypothesis-generating study suggest MitoG228A has potential to be used as a risk factor in the clinic and as a target for therapeutics. With validation via an independent cohort, MitoG228A could be used to estimate cataract risk for a Latino to reduce complications later in life. |
format | Online Article Text |
id | pubmed-7408807 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-74088072020-08-19 A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population Miller, Brendan Torres, Mina Jiang, Xuejuan McKean-Cowdin, Roberta Nousome, Darryl Kim, Su-Jeong Mehta, Hemal H. Yen, Kelvin Cohen, Pinchas Varma, Rohit Transl Vis Sci Technol Article PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association between mitochondrial dysfunction and cataracts. Our purpose was to identify a mitochondrial DNA variant that associated with cataracts in a large-scale Latino population. METHODS: We conducted an MiWAS to identify mitochondrial single-nucleotide polymorphisms that modify cataract risk in nearly 3500 individuals enrolled in the Los Angles Latino Eye Study cohort, the largest Latino-specific cohort with comprehensive cataract data. Our analytic strategy for MiWAS included logistic regression on cataract occurrence while controlling for mitochondrial genetic ancestry, age, and biological sex. RESULTS: We found that MitoG228A (rs41323649) alternative allele carriers experienced a five times greater risk for cataracts compared with reference allele carriers. Alternative allele carriers also developed cataracts earlier in life compared with reference allele carriers. Intracohort cross-validation with 10-fold resampling and five repeats showed that the effect of MitoG228A remained significant. CONCLUSIONS: MitoG228A increased risk for cataracts five-fold in approximately 3500 Latinos. To the best of our knowledge, this is the first cataract MiWAS on a large-scale Latino population. This association needs to be validated in an independent cohort. TRANSLATIONAL RELEVANCE: Our discovery hypothesis-generating study suggest MitoG228A has potential to be used as a risk factor in the clinic and as a target for therapeutics. With validation via an independent cohort, MitoG228A could be used to estimate cataract risk for a Latino to reduce complications later in life. The Association for Research in Vision and Ophthalmology 2020-05-23 /pmc/articles/PMC7408807/ /pubmed/32821522 http://dx.doi.org/10.1167/tvst.9.6.25 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Article Miller, Brendan Torres, Mina Jiang, Xuejuan McKean-Cowdin, Roberta Nousome, Darryl Kim, Su-Jeong Mehta, Hemal H. Yen, Kelvin Cohen, Pinchas Varma, Rohit A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title | A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title_full | A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title_fullStr | A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title_full_unstemmed | A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title_short | A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population |
title_sort | mitochondrial genome-wide association study of cataract in a latino population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7408807/ https://www.ncbi.nlm.nih.gov/pubmed/32821522 http://dx.doi.org/10.1167/tvst.9.6.25 |
work_keys_str_mv | AT millerbrendan amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT torresmina amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT jiangxuejuan amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT mckeancowdinroberta amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT nousomedarryl amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT kimsujeong amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT mehtahemalh amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT yenkelvin amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT cohenpinchas amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT varmarohit amitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT millerbrendan mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT torresmina mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT jiangxuejuan mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT mckeancowdinroberta mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT nousomedarryl mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT kimsujeong mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT mehtahemalh mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT yenkelvin mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT cohenpinchas mitochondrialgenomewideassociationstudyofcataractinalatinopopulation AT varmarohit mitochondrialgenomewideassociationstudyofcataractinalatinopopulation |