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A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population

PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association be...

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Autores principales: Miller, Brendan, Torres, Mina, Jiang, Xuejuan, McKean-Cowdin, Roberta, Nousome, Darryl, Kim, Su-Jeong, Mehta, Hemal H., Yen, Kelvin, Cohen, Pinchas, Varma, Rohit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7408807/
https://www.ncbi.nlm.nih.gov/pubmed/32821522
http://dx.doi.org/10.1167/tvst.9.6.25
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author Miller, Brendan
Torres, Mina
Jiang, Xuejuan
McKean-Cowdin, Roberta
Nousome, Darryl
Kim, Su-Jeong
Mehta, Hemal H.
Yen, Kelvin
Cohen, Pinchas
Varma, Rohit
author_facet Miller, Brendan
Torres, Mina
Jiang, Xuejuan
McKean-Cowdin, Roberta
Nousome, Darryl
Kim, Su-Jeong
Mehta, Hemal H.
Yen, Kelvin
Cohen, Pinchas
Varma, Rohit
author_sort Miller, Brendan
collection PubMed
description PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association between mitochondrial dysfunction and cataracts. Our purpose was to identify a mitochondrial DNA variant that associated with cataracts in a large-scale Latino population. METHODS: We conducted an MiWAS to identify mitochondrial single-nucleotide polymorphisms that modify cataract risk in nearly 3500 individuals enrolled in the Los Angles Latino Eye Study cohort, the largest Latino-specific cohort with comprehensive cataract data. Our analytic strategy for MiWAS included logistic regression on cataract occurrence while controlling for mitochondrial genetic ancestry, age, and biological sex. RESULTS: We found that MitoG228A (rs41323649) alternative allele carriers experienced a five times greater risk for cataracts compared with reference allele carriers. Alternative allele carriers also developed cataracts earlier in life compared with reference allele carriers. Intracohort cross-validation with 10-fold resampling and five repeats showed that the effect of MitoG228A remained significant. CONCLUSIONS: MitoG228A increased risk for cataracts five-fold in approximately 3500 Latinos. To the best of our knowledge, this is the first cataract MiWAS on a large-scale Latino population. This association needs to be validated in an independent cohort. TRANSLATIONAL RELEVANCE: Our discovery hypothesis-generating study suggest MitoG228A has potential to be used as a risk factor in the clinic and as a target for therapeutics. With validation via an independent cohort, MitoG228A could be used to estimate cataract risk for a Latino to reduce complications later in life.
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spelling pubmed-74088072020-08-19 A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population Miller, Brendan Torres, Mina Jiang, Xuejuan McKean-Cowdin, Roberta Nousome, Darryl Kim, Su-Jeong Mehta, Hemal H. Yen, Kelvin Cohen, Pinchas Varma, Rohit Transl Vis Sci Technol Article PURPOSE: Over 9.5 million Latinos could be affected by cataracts by 2050. However, no known cataract genetic risk alleles have been identified in Latinos. Moreover, no mitochondrial genome-wide association studies (MiWAS) have been conducted on cataracts in a Latino cohort despite the association between mitochondrial dysfunction and cataracts. Our purpose was to identify a mitochondrial DNA variant that associated with cataracts in a large-scale Latino population. METHODS: We conducted an MiWAS to identify mitochondrial single-nucleotide polymorphisms that modify cataract risk in nearly 3500 individuals enrolled in the Los Angles Latino Eye Study cohort, the largest Latino-specific cohort with comprehensive cataract data. Our analytic strategy for MiWAS included logistic regression on cataract occurrence while controlling for mitochondrial genetic ancestry, age, and biological sex. RESULTS: We found that MitoG228A (rs41323649) alternative allele carriers experienced a five times greater risk for cataracts compared with reference allele carriers. Alternative allele carriers also developed cataracts earlier in life compared with reference allele carriers. Intracohort cross-validation with 10-fold resampling and five repeats showed that the effect of MitoG228A remained significant. CONCLUSIONS: MitoG228A increased risk for cataracts five-fold in approximately 3500 Latinos. To the best of our knowledge, this is the first cataract MiWAS on a large-scale Latino population. This association needs to be validated in an independent cohort. TRANSLATIONAL RELEVANCE: Our discovery hypothesis-generating study suggest MitoG228A has potential to be used as a risk factor in the clinic and as a target for therapeutics. With validation via an independent cohort, MitoG228A could be used to estimate cataract risk for a Latino to reduce complications later in life. The Association for Research in Vision and Ophthalmology 2020-05-23 /pmc/articles/PMC7408807/ /pubmed/32821522 http://dx.doi.org/10.1167/tvst.9.6.25 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Article
Miller, Brendan
Torres, Mina
Jiang, Xuejuan
McKean-Cowdin, Roberta
Nousome, Darryl
Kim, Su-Jeong
Mehta, Hemal H.
Yen, Kelvin
Cohen, Pinchas
Varma, Rohit
A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title_full A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title_fullStr A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title_full_unstemmed A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title_short A Mitochondrial Genome-Wide Association Study of Cataract in a Latino Population
title_sort mitochondrial genome-wide association study of cataract in a latino population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7408807/
https://www.ncbi.nlm.nih.gov/pubmed/32821522
http://dx.doi.org/10.1167/tvst.9.6.25
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