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The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409348/ https://www.ncbi.nlm.nih.gov/pubmed/32708088 http://dx.doi.org/10.3390/cancers12071982 |
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author | Pereira, Adenilson Leão Magalhães, Leandro Pantoja, Rafael Pompeu Araújo, Gilderlanio Ribeiro-dos-Santos, Ândrea Vidal, Amanda Ferreira |
author_facet | Pereira, Adenilson Leão Magalhães, Leandro Pantoja, Rafael Pompeu Araújo, Gilderlanio Ribeiro-dos-Santos, Ândrea Vidal, Amanda Ferreira |
author_sort | Pereira, Adenilson Leão |
collection | PubMed |
description | Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression are not well understood. We gathered miRNA and/or RBPs sponge circRNAs present in GC, and accessed their biological roles through functional enrichment of their target genes or ligand RBPs. We identified 54 sponge circRNAs in GC that are able to sponge 51 miRNAs and 103 RBPs. Then, we evaluated their host gene expression using The Cancer Genome Atlas (TCGA) database and observed that COL1A2 is the most overexpressed gene, which may be due to circHIPK3/miR-29b-c/COL1A2 axis dysregulation. We identified 27 GC-related pathways that may be affected mainly by circPVT1, circHIPK3 and circNF1. Our results indicate that circHIPK3/miR-107/BDNF/LIN28 axis may mediate chemoresistance in GC, and that circPVT1, circHIPK3, circNF1, ciRS-7 and circ_0000096 appear to be involved in gastrointestinal cancer development. Lastly, circHIPK3, circNRIP1 and circSMARCA5 were identified in different ethnic populations and may be ubiquitous modulators of gastric carcinogenesis. Overall, the studied sponge circRNAs are part of a complex RBP-circRNA-miRNA-mRNA interaction network, and are involved in the establishment, chemoresistance and progression of GC. |
format | Online Article Text |
id | pubmed-7409348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-74093482020-08-25 The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? Pereira, Adenilson Leão Magalhães, Leandro Pantoja, Rafael Pompeu Araújo, Gilderlanio Ribeiro-dos-Santos, Ândrea Vidal, Amanda Ferreira Cancers (Basel) Article Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression are not well understood. We gathered miRNA and/or RBPs sponge circRNAs present in GC, and accessed their biological roles through functional enrichment of their target genes or ligand RBPs. We identified 54 sponge circRNAs in GC that are able to sponge 51 miRNAs and 103 RBPs. Then, we evaluated their host gene expression using The Cancer Genome Atlas (TCGA) database and observed that COL1A2 is the most overexpressed gene, which may be due to circHIPK3/miR-29b-c/COL1A2 axis dysregulation. We identified 27 GC-related pathways that may be affected mainly by circPVT1, circHIPK3 and circNF1. Our results indicate that circHIPK3/miR-107/BDNF/LIN28 axis may mediate chemoresistance in GC, and that circPVT1, circHIPK3, circNF1, ciRS-7 and circ_0000096 appear to be involved in gastrointestinal cancer development. Lastly, circHIPK3, circNRIP1 and circSMARCA5 were identified in different ethnic populations and may be ubiquitous modulators of gastric carcinogenesis. Overall, the studied sponge circRNAs are part of a complex RBP-circRNA-miRNA-mRNA interaction network, and are involved in the establishment, chemoresistance and progression of GC. MDPI 2020-07-21 /pmc/articles/PMC7409348/ /pubmed/32708088 http://dx.doi.org/10.3390/cancers12071982 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pereira, Adenilson Leão Magalhães, Leandro Pantoja, Rafael Pompeu Araújo, Gilderlanio Ribeiro-dos-Santos, Ândrea Vidal, Amanda Ferreira The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title | The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title_full | The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title_fullStr | The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title_full_unstemmed | The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title_short | The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? |
title_sort | biological role of sponge circular rnas in gastric cancer: main players or coadjuvants? |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409348/ https://www.ncbi.nlm.nih.gov/pubmed/32708088 http://dx.doi.org/10.3390/cancers12071982 |
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