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The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?

Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression...

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Autores principales: Pereira, Adenilson Leão, Magalhães, Leandro, Pantoja, Rafael Pompeu, Araújo, Gilderlanio, Ribeiro-dos-Santos, Ândrea, Vidal, Amanda Ferreira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409348/
https://www.ncbi.nlm.nih.gov/pubmed/32708088
http://dx.doi.org/10.3390/cancers12071982
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author Pereira, Adenilson Leão
Magalhães, Leandro
Pantoja, Rafael Pompeu
Araújo, Gilderlanio
Ribeiro-dos-Santos, Ândrea
Vidal, Amanda Ferreira
author_facet Pereira, Adenilson Leão
Magalhães, Leandro
Pantoja, Rafael Pompeu
Araújo, Gilderlanio
Ribeiro-dos-Santos, Ândrea
Vidal, Amanda Ferreira
author_sort Pereira, Adenilson Leão
collection PubMed
description Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression are not well understood. We gathered miRNA and/or RBPs sponge circRNAs present in GC, and accessed their biological roles through functional enrichment of their target genes or ligand RBPs. We identified 54 sponge circRNAs in GC that are able to sponge 51 miRNAs and 103 RBPs. Then, we evaluated their host gene expression using The Cancer Genome Atlas (TCGA) database and observed that COL1A2 is the most overexpressed gene, which may be due to circHIPK3/miR-29b-c/COL1A2 axis dysregulation. We identified 27 GC-related pathways that may be affected mainly by circPVT1, circHIPK3 and circNF1. Our results indicate that circHIPK3/miR-107/BDNF/LIN28 axis may mediate chemoresistance in GC, and that circPVT1, circHIPK3, circNF1, ciRS-7 and circ_0000096 appear to be involved in gastrointestinal cancer development. Lastly, circHIPK3, circNRIP1 and circSMARCA5 were identified in different ethnic populations and may be ubiquitous modulators of gastric carcinogenesis. Overall, the studied sponge circRNAs are part of a complex RBP-circRNA-miRNA-mRNA interaction network, and are involved in the establishment, chemoresistance and progression of GC.
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spelling pubmed-74093482020-08-25 The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants? Pereira, Adenilson Leão Magalhães, Leandro Pantoja, Rafael Pompeu Araújo, Gilderlanio Ribeiro-dos-Santos, Ândrea Vidal, Amanda Ferreira Cancers (Basel) Article Circular RNAs (circRNAs) are a new class of long noncoding RNAs able to perform multiple functions, including sponging microRNAs (miRNAs) and RNA-Binding Proteins (RBPs). They play an important role in gastric carcinogenesis, but its involvement during gastric cancer (GC) development and progression are not well understood. We gathered miRNA and/or RBPs sponge circRNAs present in GC, and accessed their biological roles through functional enrichment of their target genes or ligand RBPs. We identified 54 sponge circRNAs in GC that are able to sponge 51 miRNAs and 103 RBPs. Then, we evaluated their host gene expression using The Cancer Genome Atlas (TCGA) database and observed that COL1A2 is the most overexpressed gene, which may be due to circHIPK3/miR-29b-c/COL1A2 axis dysregulation. We identified 27 GC-related pathways that may be affected mainly by circPVT1, circHIPK3 and circNF1. Our results indicate that circHIPK3/miR-107/BDNF/LIN28 axis may mediate chemoresistance in GC, and that circPVT1, circHIPK3, circNF1, ciRS-7 and circ_0000096 appear to be involved in gastrointestinal cancer development. Lastly, circHIPK3, circNRIP1 and circSMARCA5 were identified in different ethnic populations and may be ubiquitous modulators of gastric carcinogenesis. Overall, the studied sponge circRNAs are part of a complex RBP-circRNA-miRNA-mRNA interaction network, and are involved in the establishment, chemoresistance and progression of GC. MDPI 2020-07-21 /pmc/articles/PMC7409348/ /pubmed/32708088 http://dx.doi.org/10.3390/cancers12071982 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pereira, Adenilson Leão
Magalhães, Leandro
Pantoja, Rafael Pompeu
Araújo, Gilderlanio
Ribeiro-dos-Santos, Ândrea
Vidal, Amanda Ferreira
The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title_full The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title_fullStr The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title_full_unstemmed The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title_short The Biological Role of Sponge Circular RNAs in Gastric Cancer: Main Players or Coadjuvants?
title_sort biological role of sponge circular rnas in gastric cancer: main players or coadjuvants?
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409348/
https://www.ncbi.nlm.nih.gov/pubmed/32708088
http://dx.doi.org/10.3390/cancers12071982
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