Cargando…

Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms

Pectobacterium punjabense is a newly described species causing blackleg disease in potato plants. Therefore, by the combination of long (Oxford Nanopore Technologies, MinION) and short (Illumina MiSeq) reads, we sequenced the complete genome of P. punjabense SS95(T), which contains a circular chromo...

Descripción completa

Detalles Bibliográficos
Autores principales: Sarfraz, Sohaib, Oulghazi, Saïd, Cigna, Jérémy, Sahi, Shahbaz Talib, Riaz, Kashif, Tufail, Muhammad Rizwan, Fayyaz, Amna, Naveed, Khalid, Hameed, Akhtar, Lopez-Roques, Céline, Vandecasteele, Céline, Faure, Denis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409842/
https://www.ncbi.nlm.nih.gov/pubmed/32763925
http://dx.doi.org/10.1128/MRA.00420-20
_version_ 1783568135336493056
author Sarfraz, Sohaib
Oulghazi, Saïd
Cigna, Jérémy
Sahi, Shahbaz Talib
Riaz, Kashif
Tufail, Muhammad Rizwan
Fayyaz, Amna
Naveed, Khalid
Hameed, Akhtar
Lopez-Roques, Céline
Vandecasteele, Céline
Faure, Denis
author_facet Sarfraz, Sohaib
Oulghazi, Saïd
Cigna, Jérémy
Sahi, Shahbaz Talib
Riaz, Kashif
Tufail, Muhammad Rizwan
Fayyaz, Amna
Naveed, Khalid
Hameed, Akhtar
Lopez-Roques, Céline
Vandecasteele, Céline
Faure, Denis
author_sort Sarfraz, Sohaib
collection PubMed
description Pectobacterium punjabense is a newly described species causing blackleg disease in potato plants. Therefore, by the combination of long (Oxford Nanopore Technologies, MinION) and short (Illumina MiSeq) reads, we sequenced the complete genome of P. punjabense SS95(T), which contains a circular chromosome of 4.793 Mb with a GC content of 50.7%.
format Online
Article
Text
id pubmed-7409842
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-74098422020-08-11 Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms Sarfraz, Sohaib Oulghazi, Saïd Cigna, Jérémy Sahi, Shahbaz Talib Riaz, Kashif Tufail, Muhammad Rizwan Fayyaz, Amna Naveed, Khalid Hameed, Akhtar Lopez-Roques, Céline Vandecasteele, Céline Faure, Denis Microbiol Resour Announc Genome Sequences Pectobacterium punjabense is a newly described species causing blackleg disease in potato plants. Therefore, by the combination of long (Oxford Nanopore Technologies, MinION) and short (Illumina MiSeq) reads, we sequenced the complete genome of P. punjabense SS95(T), which contains a circular chromosome of 4.793 Mb with a GC content of 50.7%. American Society for Microbiology 2020-08-06 /pmc/articles/PMC7409842/ /pubmed/32763925 http://dx.doi.org/10.1128/MRA.00420-20 Text en Copyright © 2020 Sarfraz et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Sarfraz, Sohaib
Oulghazi, Saïd
Cigna, Jérémy
Sahi, Shahbaz Talib
Riaz, Kashif
Tufail, Muhammad Rizwan
Fayyaz, Amna
Naveed, Khalid
Hameed, Akhtar
Lopez-Roques, Céline
Vandecasteele, Céline
Faure, Denis
Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title_full Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title_fullStr Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title_full_unstemmed Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title_short Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms
title_sort complete genome sequence of the type strain pectobacterium punjabense ss95, isolated from a potato plant with blackleg symptoms
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7409842/
https://www.ncbi.nlm.nih.gov/pubmed/32763925
http://dx.doi.org/10.1128/MRA.00420-20
work_keys_str_mv AT sarfrazsohaib completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT oulghazisaid completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT cignajeremy completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT sahishahbaztalib completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT riazkashif completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT tufailmuhammadrizwan completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT fayyazamna completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT naveedkhalid completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT hameedakhtar completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT lopezroquesceline completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT vandecasteeleceline completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms
AT fauredenis completegenomesequenceofthetypestrainpectobacteriumpunjabensess95isolatedfromapotatoplantwithblacklegsymptoms