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Change in global transmission rates of COVID-19 through May 6 2020

We analyzed COVID-19 data through May 6th, 2020 using a partially observed Markov process. Our method uses a hybrid deterministic and stochastic formalism that allows for time variable transmission rates and detection probabilities. The model was fit using iterated particle filtering to case count a...

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Detalles Bibliográficos
Autores principales: Romero-Severson, Ethan Obie, Hengartner, Nick, Meadors, Grant, Ke, Ruian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7410207/
https://www.ncbi.nlm.nih.gov/pubmed/32760158
http://dx.doi.org/10.1371/journal.pone.0236776
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author Romero-Severson, Ethan Obie
Hengartner, Nick
Meadors, Grant
Ke, Ruian
author_facet Romero-Severson, Ethan Obie
Hengartner, Nick
Meadors, Grant
Ke, Ruian
author_sort Romero-Severson, Ethan Obie
collection PubMed
description We analyzed COVID-19 data through May 6th, 2020 using a partially observed Markov process. Our method uses a hybrid deterministic and stochastic formalism that allows for time variable transmission rates and detection probabilities. The model was fit using iterated particle filtering to case count and death count time series from 55 countries. We found evidence for a shrinking epidemic in 30 of the 55 examined countries. Of those 30 countries, 27 have significant evidence for subcritical transmission rates, although the decline in new cases is relatively slow compared to the initial growth rates. Generally, the transmission rates in Europe were lower than in the Americas and Asia. This suggests that global scale social distancing efforts to slow the spread of COVID-19 are effective although they need to be strengthened in many regions and maintained in others to avoid further resurgence of COVID-19. The slow decline also suggests alternative strategies to control the virus are needed before social distancing efforts are partially relaxed.
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spelling pubmed-74102072020-08-13 Change in global transmission rates of COVID-19 through May 6 2020 Romero-Severson, Ethan Obie Hengartner, Nick Meadors, Grant Ke, Ruian PLoS One Research Article We analyzed COVID-19 data through May 6th, 2020 using a partially observed Markov process. Our method uses a hybrid deterministic and stochastic formalism that allows for time variable transmission rates and detection probabilities. The model was fit using iterated particle filtering to case count and death count time series from 55 countries. We found evidence for a shrinking epidemic in 30 of the 55 examined countries. Of those 30 countries, 27 have significant evidence for subcritical transmission rates, although the decline in new cases is relatively slow compared to the initial growth rates. Generally, the transmission rates in Europe were lower than in the Americas and Asia. This suggests that global scale social distancing efforts to slow the spread of COVID-19 are effective although they need to be strengthened in many regions and maintained in others to avoid further resurgence of COVID-19. The slow decline also suggests alternative strategies to control the virus are needed before social distancing efforts are partially relaxed. Public Library of Science 2020-08-06 /pmc/articles/PMC7410207/ /pubmed/32760158 http://dx.doi.org/10.1371/journal.pone.0236776 Text en © 2020 Romero-Severson et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Romero-Severson, Ethan Obie
Hengartner, Nick
Meadors, Grant
Ke, Ruian
Change in global transmission rates of COVID-19 through May 6 2020
title Change in global transmission rates of COVID-19 through May 6 2020
title_full Change in global transmission rates of COVID-19 through May 6 2020
title_fullStr Change in global transmission rates of COVID-19 through May 6 2020
title_full_unstemmed Change in global transmission rates of COVID-19 through May 6 2020
title_short Change in global transmission rates of COVID-19 through May 6 2020
title_sort change in global transmission rates of covid-19 through may 6 2020
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7410207/
https://www.ncbi.nlm.nih.gov/pubmed/32760158
http://dx.doi.org/10.1371/journal.pone.0236776
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