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Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations
This study investigated the associations between image features extracted from tumor (18)F-fluorodeoxyglucose (FDG) uptake and genetic alterations in patients with lung cancer. A total of 137 patients (age, 62.7 ± 10.2 years) who underwent FDG positron emission tomography/computed tomography (PET/CT...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411040/ https://www.ncbi.nlm.nih.gov/pubmed/32764738 http://dx.doi.org/10.1038/s41598-020-70168-x |
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author | Kim, Gahyun Kim, Jinho Cha, Hongui Park, Woong-Yang Ahn, Jin Seok Ahn, Myung-Ju Park, Keunchil Park, Yong-Jin Choi, Joon Young Lee, Kyung-Han Lee, Se-Hoon Moon, Seung Hwan |
author_facet | Kim, Gahyun Kim, Jinho Cha, Hongui Park, Woong-Yang Ahn, Jin Seok Ahn, Myung-Ju Park, Keunchil Park, Yong-Jin Choi, Joon Young Lee, Kyung-Han Lee, Se-Hoon Moon, Seung Hwan |
author_sort | Kim, Gahyun |
collection | PubMed |
description | This study investigated the associations between image features extracted from tumor (18)F-fluorodeoxyglucose (FDG) uptake and genetic alterations in patients with lung cancer. A total of 137 patients (age, 62.7 ± 10.2 years) who underwent FDG positron emission tomography/computed tomography (PET/CT) and targeted deep sequencing analysis for a tumor lesion, comprising 61 adenocarcinoma (ADC), 31 squamous cell carcinoma (SQCC), and 45 small cell lung cancer (SCLC) patients, were enrolled in this study. From the tumor lesions, 86 image features were extracted, and 381 genes were assessed. PET features were associated with genetic mutations: 41 genes with 24 features in ADC; 35 genes with 22 features in SQCC; and 43 genes with 25 features in SCLC (FDR < 0.05). Clusters based on PET features showed an association with alterations in oncogenic signaling pathways: Cell cycle and WNT signaling pathways in ADC (p = 0.023, p = 0.035, respectively); Cell cycle, p53, and WNT in SQCC (p = 0.045, 0.009, and 0.029, respectively); and TGFβ in SCLC (p = 0.030). In addition, SUV(peak) and SUV(max) were associated with a mutation of the TGFβ signaling pathway in ADC (FDR = 0.001, < 0.001). In this study, PET image features had significant associations with alterations in genes and oncogenic signaling pathways in patients with lung cancer. |
format | Online Article Text |
id | pubmed-7411040 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74110402020-08-10 Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations Kim, Gahyun Kim, Jinho Cha, Hongui Park, Woong-Yang Ahn, Jin Seok Ahn, Myung-Ju Park, Keunchil Park, Yong-Jin Choi, Joon Young Lee, Kyung-Han Lee, Se-Hoon Moon, Seung Hwan Sci Rep Article This study investigated the associations between image features extracted from tumor (18)F-fluorodeoxyglucose (FDG) uptake and genetic alterations in patients with lung cancer. A total of 137 patients (age, 62.7 ± 10.2 years) who underwent FDG positron emission tomography/computed tomography (PET/CT) and targeted deep sequencing analysis for a tumor lesion, comprising 61 adenocarcinoma (ADC), 31 squamous cell carcinoma (SQCC), and 45 small cell lung cancer (SCLC) patients, were enrolled in this study. From the tumor lesions, 86 image features were extracted, and 381 genes were assessed. PET features were associated with genetic mutations: 41 genes with 24 features in ADC; 35 genes with 22 features in SQCC; and 43 genes with 25 features in SCLC (FDR < 0.05). Clusters based on PET features showed an association with alterations in oncogenic signaling pathways: Cell cycle and WNT signaling pathways in ADC (p = 0.023, p = 0.035, respectively); Cell cycle, p53, and WNT in SQCC (p = 0.045, 0.009, and 0.029, respectively); and TGFβ in SCLC (p = 0.030). In addition, SUV(peak) and SUV(max) were associated with a mutation of the TGFβ signaling pathway in ADC (FDR = 0.001, < 0.001). In this study, PET image features had significant associations with alterations in genes and oncogenic signaling pathways in patients with lung cancer. Nature Publishing Group UK 2020-08-06 /pmc/articles/PMC7411040/ /pubmed/32764738 http://dx.doi.org/10.1038/s41598-020-70168-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kim, Gahyun Kim, Jinho Cha, Hongui Park, Woong-Yang Ahn, Jin Seok Ahn, Myung-Ju Park, Keunchil Park, Yong-Jin Choi, Joon Young Lee, Kyung-Han Lee, Se-Hoon Moon, Seung Hwan Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title | Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title_full | Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title_fullStr | Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title_full_unstemmed | Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title_short | Metabolic radiogenomics in lung cancer: associations between FDG PET image features and oncogenic signaling pathway alterations |
title_sort | metabolic radiogenomics in lung cancer: associations between fdg pet image features and oncogenic signaling pathway alterations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411040/ https://www.ncbi.nlm.nih.gov/pubmed/32764738 http://dx.doi.org/10.1038/s41598-020-70168-x |
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