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Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel

Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. Th...

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Autores principales: Carlomagno, Tiziano, Cringoli, Maria C., Kralj, Slavko, Kurbasic, Marina, Fornasiero, Paolo, Pengo, Paolo, Marchesan, Silvia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411710/
https://www.ncbi.nlm.nih.gov/pubmed/32630001
http://dx.doi.org/10.3390/molecules25132995
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author Carlomagno, Tiziano
Cringoli, Maria C.
Kralj, Slavko
Kurbasic, Marina
Fornasiero, Paolo
Pengo, Paolo
Marchesan, Silvia
author_facet Carlomagno, Tiziano
Cringoli, Maria C.
Kralj, Slavko
Kurbasic, Marina
Fornasiero, Paolo
Pengo, Paolo
Marchesan, Silvia
author_sort Carlomagno, Tiziano
collection PubMed
description Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. This work applied emerging design rules to the heterochiral octapeptide sequence His–Leu–(D)Leu–Ile–His–Leu–(D)Leu–Ile for self-assembly into nanofibrils that, at higher concentration, give rise to a supramolecular hydrogel for the mimicry of esterase-like activity. The peptide was synthesized by solid-phase and purified by HPLC, while its identity was confirmed by (1)H-NMR and electrospray ionization (ESI)-MS. The hydrogel formed by this peptide was studied with oscillatory rheometry, and the supramolecular behavior of the peptide was investigated with transmission electron microscopy (TEM) analysis, circular dichroism (CD) spectroscopy, thioflavin T amyloid fluorescence assay, and attenuated total reflectance (ATR) Fourier-transform infrared (FT-IR) spectroscopy. The biocatalytic activity was studied by monitoring the hydrolysis of p-nitrophenyl acetate (pNPA) at neutral pH, and the reaction kinetics followed an apparent Michaelis–Menten model, for which a Lineweaver–Burk plot was produced to determine its enzymatic parameters for a comparison with the literature. Finally, LC–MS analysis was conducted on a series of experiments to evaluate the extent of, if any, undesired peptide acetylation at the N-terminus. In conclusion, we provide new insights that allow gaining a clearer picture of self-assembling peptide design rules for biocatalysis.
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spelling pubmed-74117102020-08-25 Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel Carlomagno, Tiziano Cringoli, Maria C. Kralj, Slavko Kurbasic, Marina Fornasiero, Paolo Pengo, Paolo Marchesan, Silvia Molecules Article Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. This work applied emerging design rules to the heterochiral octapeptide sequence His–Leu–(D)Leu–Ile–His–Leu–(D)Leu–Ile for self-assembly into nanofibrils that, at higher concentration, give rise to a supramolecular hydrogel for the mimicry of esterase-like activity. The peptide was synthesized by solid-phase and purified by HPLC, while its identity was confirmed by (1)H-NMR and electrospray ionization (ESI)-MS. The hydrogel formed by this peptide was studied with oscillatory rheometry, and the supramolecular behavior of the peptide was investigated with transmission electron microscopy (TEM) analysis, circular dichroism (CD) spectroscopy, thioflavin T amyloid fluorescence assay, and attenuated total reflectance (ATR) Fourier-transform infrared (FT-IR) spectroscopy. The biocatalytic activity was studied by monitoring the hydrolysis of p-nitrophenyl acetate (pNPA) at neutral pH, and the reaction kinetics followed an apparent Michaelis–Menten model, for which a Lineweaver–Burk plot was produced to determine its enzymatic parameters for a comparison with the literature. Finally, LC–MS analysis was conducted on a series of experiments to evaluate the extent of, if any, undesired peptide acetylation at the N-terminus. In conclusion, we provide new insights that allow gaining a clearer picture of self-assembling peptide design rules for biocatalysis. MDPI 2020-06-30 /pmc/articles/PMC7411710/ /pubmed/32630001 http://dx.doi.org/10.3390/molecules25132995 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Carlomagno, Tiziano
Cringoli, Maria C.
Kralj, Slavko
Kurbasic, Marina
Fornasiero, Paolo
Pengo, Paolo
Marchesan, Silvia
Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title_full Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title_fullStr Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title_full_unstemmed Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title_short Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
title_sort biocatalysis of d,l-peptide nanofibrillar hydrogel
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411710/
https://www.ncbi.nlm.nih.gov/pubmed/32630001
http://dx.doi.org/10.3390/molecules25132995
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