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Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel
Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. Th...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411710/ https://www.ncbi.nlm.nih.gov/pubmed/32630001 http://dx.doi.org/10.3390/molecules25132995 |
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author | Carlomagno, Tiziano Cringoli, Maria C. Kralj, Slavko Kurbasic, Marina Fornasiero, Paolo Pengo, Paolo Marchesan, Silvia |
author_facet | Carlomagno, Tiziano Cringoli, Maria C. Kralj, Slavko Kurbasic, Marina Fornasiero, Paolo Pengo, Paolo Marchesan, Silvia |
author_sort | Carlomagno, Tiziano |
collection | PubMed |
description | Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. This work applied emerging design rules to the heterochiral octapeptide sequence His–Leu–(D)Leu–Ile–His–Leu–(D)Leu–Ile for self-assembly into nanofibrils that, at higher concentration, give rise to a supramolecular hydrogel for the mimicry of esterase-like activity. The peptide was synthesized by solid-phase and purified by HPLC, while its identity was confirmed by (1)H-NMR and electrospray ionization (ESI)-MS. The hydrogel formed by this peptide was studied with oscillatory rheometry, and the supramolecular behavior of the peptide was investigated with transmission electron microscopy (TEM) analysis, circular dichroism (CD) spectroscopy, thioflavin T amyloid fluorescence assay, and attenuated total reflectance (ATR) Fourier-transform infrared (FT-IR) spectroscopy. The biocatalytic activity was studied by monitoring the hydrolysis of p-nitrophenyl acetate (pNPA) at neutral pH, and the reaction kinetics followed an apparent Michaelis–Menten model, for which a Lineweaver–Burk plot was produced to determine its enzymatic parameters for a comparison with the literature. Finally, LC–MS analysis was conducted on a series of experiments to evaluate the extent of, if any, undesired peptide acetylation at the N-terminus. In conclusion, we provide new insights that allow gaining a clearer picture of self-assembling peptide design rules for biocatalysis. |
format | Online Article Text |
id | pubmed-7411710 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-74117102020-08-25 Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel Carlomagno, Tiziano Cringoli, Maria C. Kralj, Slavko Kurbasic, Marina Fornasiero, Paolo Pengo, Paolo Marchesan, Silvia Molecules Article Self-assembling peptides are attracting wide interest as biodegradable building blocks to achieve functional nanomaterials that do not persist in the environment. Amongst the many applications, biocatalysis is gaining momentum, although a clear structure-to-activity relationship is still lacking. This work applied emerging design rules to the heterochiral octapeptide sequence His–Leu–(D)Leu–Ile–His–Leu–(D)Leu–Ile for self-assembly into nanofibrils that, at higher concentration, give rise to a supramolecular hydrogel for the mimicry of esterase-like activity. The peptide was synthesized by solid-phase and purified by HPLC, while its identity was confirmed by (1)H-NMR and electrospray ionization (ESI)-MS. The hydrogel formed by this peptide was studied with oscillatory rheometry, and the supramolecular behavior of the peptide was investigated with transmission electron microscopy (TEM) analysis, circular dichroism (CD) spectroscopy, thioflavin T amyloid fluorescence assay, and attenuated total reflectance (ATR) Fourier-transform infrared (FT-IR) spectroscopy. The biocatalytic activity was studied by monitoring the hydrolysis of p-nitrophenyl acetate (pNPA) at neutral pH, and the reaction kinetics followed an apparent Michaelis–Menten model, for which a Lineweaver–Burk plot was produced to determine its enzymatic parameters for a comparison with the literature. Finally, LC–MS analysis was conducted on a series of experiments to evaluate the extent of, if any, undesired peptide acetylation at the N-terminus. In conclusion, we provide new insights that allow gaining a clearer picture of self-assembling peptide design rules for biocatalysis. MDPI 2020-06-30 /pmc/articles/PMC7411710/ /pubmed/32630001 http://dx.doi.org/10.3390/molecules25132995 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Carlomagno, Tiziano Cringoli, Maria C. Kralj, Slavko Kurbasic, Marina Fornasiero, Paolo Pengo, Paolo Marchesan, Silvia Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title | Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title_full | Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title_fullStr | Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title_full_unstemmed | Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title_short | Biocatalysis of d,l-Peptide Nanofibrillar Hydrogel |
title_sort | biocatalysis of d,l-peptide nanofibrillar hydrogel |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7411710/ https://www.ncbi.nlm.nih.gov/pubmed/32630001 http://dx.doi.org/10.3390/molecules25132995 |
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