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Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio

Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here con...

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Autores principales: Tiné, Marco A., Silva, Michele, Grombone-Guaratini, Maria T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7412758/
https://www.ncbi.nlm.nih.gov/pubmed/32793777
http://dx.doi.org/10.1016/j.dib.2020.106078
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author Tiné, Marco A.
Silva, Michele
Grombone-Guaratini, Maria T.
author_facet Tiné, Marco A.
Silva, Michele
Grombone-Guaratini, Maria T.
author_sort Tiné, Marco A.
collection PubMed
description Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here contains the results of cell walls fractioning of culms from six neotropical bamboo species: Apoclada simplex, Chusquea capituliflora, Filgueirasia arenicola, Filgueirasia cannavieira, Guadua tagoara, Merostachys riedeliana and Parodiolyra micrantha. The cell walls were fractionated with oxalate and increasing NaOH concentrations sequentially. The yield and the monosaccharide compositions showed a small amount of pectin as expected for Poaceae and arabinoxylan as the main hemicellulose. The digestion of the hemicellulose fraction with xylanase produced an oligosaccharide profile that could be used to compare the similarity of the arabinoxylan from different species without identifying each individual oligosaccharide. Our data showed that the differences in cell wall composition do not vary according to the growth habit, but are in close association with the phylogenetic relations within the family. The differences in load capacity in plants with different habits (trees and herbs, for example) are more associated with the amount of support tissues than with different cell wall compositions. The importance of evaluate the cell wall of tropical bamboo species aimed at improving resources for biotechnology was discussed by Tine et al. 2020 [1].
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spelling pubmed-74127582020-08-12 Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio Tiné, Marco A. Silva, Michele Grombone-Guaratini, Maria T. Data Brief Biochemistry, Genetics and Molecular Biology Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here contains the results of cell walls fractioning of culms from six neotropical bamboo species: Apoclada simplex, Chusquea capituliflora, Filgueirasia arenicola, Filgueirasia cannavieira, Guadua tagoara, Merostachys riedeliana and Parodiolyra micrantha. The cell walls were fractionated with oxalate and increasing NaOH concentrations sequentially. The yield and the monosaccharide compositions showed a small amount of pectin as expected for Poaceae and arabinoxylan as the main hemicellulose. The digestion of the hemicellulose fraction with xylanase produced an oligosaccharide profile that could be used to compare the similarity of the arabinoxylan from different species without identifying each individual oligosaccharide. Our data showed that the differences in cell wall composition do not vary according to the growth habit, but are in close association with the phylogenetic relations within the family. The differences in load capacity in plants with different habits (trees and herbs, for example) are more associated with the amount of support tissues than with different cell wall compositions. The importance of evaluate the cell wall of tropical bamboo species aimed at improving resources for biotechnology was discussed by Tine et al. 2020 [1]. Elsevier 2020-07-25 /pmc/articles/PMC7412758/ /pubmed/32793777 http://dx.doi.org/10.1016/j.dib.2020.106078 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Tiné, Marco A.
Silva, Michele
Grombone-Guaratini, Maria T.
Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title_full Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title_fullStr Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title_full_unstemmed Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title_short Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
title_sort culm cell-wall compositions of tribes bambuseae and olyreae from the brazilian atlantic forest: quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7412758/
https://www.ncbi.nlm.nih.gov/pubmed/32793777
http://dx.doi.org/10.1016/j.dib.2020.106078
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