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Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio
Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here con...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7412758/ https://www.ncbi.nlm.nih.gov/pubmed/32793777 http://dx.doi.org/10.1016/j.dib.2020.106078 |
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author | Tiné, Marco A. Silva, Michele Grombone-Guaratini, Maria T. |
author_facet | Tiné, Marco A. Silva, Michele Grombone-Guaratini, Maria T. |
author_sort | Tiné, Marco A. |
collection | PubMed |
description | Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here contains the results of cell walls fractioning of culms from six neotropical bamboo species: Apoclada simplex, Chusquea capituliflora, Filgueirasia arenicola, Filgueirasia cannavieira, Guadua tagoara, Merostachys riedeliana and Parodiolyra micrantha. The cell walls were fractionated with oxalate and increasing NaOH concentrations sequentially. The yield and the monosaccharide compositions showed a small amount of pectin as expected for Poaceae and arabinoxylan as the main hemicellulose. The digestion of the hemicellulose fraction with xylanase produced an oligosaccharide profile that could be used to compare the similarity of the arabinoxylan from different species without identifying each individual oligosaccharide. Our data showed that the differences in cell wall composition do not vary according to the growth habit, but are in close association with the phylogenetic relations within the family. The differences in load capacity in plants with different habits (trees and herbs, for example) are more associated with the amount of support tissues than with different cell wall compositions. The importance of evaluate the cell wall of tropical bamboo species aimed at improving resources for biotechnology was discussed by Tine et al. 2020 [1]. |
format | Online Article Text |
id | pubmed-7412758 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-74127582020-08-12 Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio Tiné, Marco A. Silva, Michele Grombone-Guaratini, Maria T. Data Brief Biochemistry, Genetics and Molecular Biology Bamboos are known for their economical, ecological, and cultural importance. The plants can be annual or perennial and can be herbs, shrubs or trees and can also show different growth habits. The cell wall is the main component of the mechanical properties of the tissues. Data set presented here contains the results of cell walls fractioning of culms from six neotropical bamboo species: Apoclada simplex, Chusquea capituliflora, Filgueirasia arenicola, Filgueirasia cannavieira, Guadua tagoara, Merostachys riedeliana and Parodiolyra micrantha. The cell walls were fractionated with oxalate and increasing NaOH concentrations sequentially. The yield and the monosaccharide compositions showed a small amount of pectin as expected for Poaceae and arabinoxylan as the main hemicellulose. The digestion of the hemicellulose fraction with xylanase produced an oligosaccharide profile that could be used to compare the similarity of the arabinoxylan from different species without identifying each individual oligosaccharide. Our data showed that the differences in cell wall composition do not vary according to the growth habit, but are in close association with the phylogenetic relations within the family. The differences in load capacity in plants with different habits (trees and herbs, for example) are more associated with the amount of support tissues than with different cell wall compositions. The importance of evaluate the cell wall of tropical bamboo species aimed at improving resources for biotechnology was discussed by Tine et al. 2020 [1]. Elsevier 2020-07-25 /pmc/articles/PMC7412758/ /pubmed/32793777 http://dx.doi.org/10.1016/j.dib.2020.106078 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Biochemistry, Genetics and Molecular Biology Tiné, Marco A. Silva, Michele Grombone-Guaratini, Maria T. Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title | Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title_full | Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title_fullStr | Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title_full_unstemmed | Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title_short | Culm cell-wall compositions of tribes Bambuseae and Olyreae from the Brazilian Atlantic Forest: Quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
title_sort | culm cell-wall compositions of tribes bambuseae and olyreae from the brazilian atlantic forest: quantitative data from monosaccharide and oligosaccharide profiling and pectin/hemicellulose ratio |
topic | Biochemistry, Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7412758/ https://www.ncbi.nlm.nih.gov/pubmed/32793777 http://dx.doi.org/10.1016/j.dib.2020.106078 |
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